Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC28.71■■■□□ 2.19
PDE6BP35913 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
PDE6BP35913 AC136469.2-201ENST00000623944 1028 ntBASIC28.71■■■□□ 2.19
PDE6BP35913 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
PDE6BP35913 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC28.7■■■□□ 2.19
PDE6BP35913 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC28.7■■■□□ 2.19
PDE6BP35913 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
PDE6BP35913 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC28.7■■■□□ 2.18
PDE6BP35913 AC241377.3-202ENST00000626088 1088 ntBASIC28.7■■■□□ 2.18
PDE6BP35913 AC241585.3-202ENST00000628937 1088 ntBASIC28.7■■■□□ 2.18
PDE6BP35913 AC245100.8-202ENST00000629247 1058 ntBASIC28.7■■■□□ 2.18
PDE6BP35913 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
PDE6BP35913 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
PDE6BP35913 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC28.69■■■□□ 2.18
PDE6BP35913 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC28.69■■■□□ 2.18
PDE6BP35913 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
PDE6BP35913 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC28.68■■■□□ 2.18
PDE6BP35913 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
PDE6BP35913 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
PDE6BP35913 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
PDE6BP35913 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC28.68■■■□□ 2.18
PDE6BP35913 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC28.68■■■□□ 2.18
PDE6BP35913 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
PDE6BP35913 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
PDE6BP35913 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
PDE6BP35913 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
PDE6BP35913 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC28.68■■■□□ 2.18
PDE6BP35913 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC28.67■■■□□ 2.18
PDE6BP35913 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC28.67■■■□□ 2.18
PDE6BP35913 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC28.67■■■□□ 2.18
PDE6BP35913 AC233992.3-201ENST00000607491 485 ntBASIC28.67■■■□□ 2.18
PDE6BP35913 MPST-208ENST00000628507 698 ntTSL 5 BASIC28.67■■■□□ 2.18
PDE6BP35913 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC28.67■■■□□ 2.18
PDE6BP35913 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
PDE6BP35913 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC28.67■■■□□ 2.18
PDE6BP35913 AC010501.1-201ENST00000606270 1962 ntBASIC28.66■■■□□ 2.18
PDE6BP35913 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
PDE6BP35913 C17orf82-201ENST00000623772 1530 ntBASIC28.66■■■□□ 2.18
PDE6BP35913 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC28.66■■■□□ 2.18
PDE6BP35913 SP2-202ENST00000613139 908 ntTSL 5 BASIC28.66■■■□□ 2.18
PDE6BP35913 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
PDE6BP35913 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC28.66■■■□□ 2.18
PDE6BP35913 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC28.66■■■□□ 2.18
PDE6BP35913 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
PDE6BP35913 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
PDE6BP35913 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC28.65■■■□□ 2.18
PDE6BP35913 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC28.65■■■□□ 2.18
PDE6BP35913 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC28.65■■■□□ 2.18
PDE6BP35913 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
PDE6BP35913 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC28.65■■■□□ 2.18
PDE6BP35913 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
PDE6BP35913 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC28.65■■■□□ 2.18
PDE6BP35913 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
PDE6BP35913 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC28.65■■■□□ 2.18
PDE6BP35913 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC28.65■■■□□ 2.18
PDE6BP35913 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC28.65■■■□□ 2.18
PDE6BP35913 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
PDE6BP35913 AK1-201ENST00000223836 736 ntTSL 3 BASIC28.64■■■□□ 2.18
PDE6BP35913 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC28.64■■■□□ 2.18
PDE6BP35913 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC28.64■■■□□ 2.18
PDE6BP35913 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.17
PDE6BP35913 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
PDE6BP35913 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
PDE6BP35913 BX842568.3-201ENST00000418104 571 ntBASIC28.63■■■□□ 2.17
PDE6BP35913 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
PDE6BP35913 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC28.63■■■□□ 2.17
PDE6BP35913 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC28.63■■■□□ 2.17
PDE6BP35913 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
PDE6BP35913 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC28.63■■■□□ 2.17
PDE6BP35913 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC28.63■■■□□ 2.17
PDE6BP35913 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC28.62■■■□□ 2.17
PDE6BP35913 RARRES2P11-201ENST00000635158 484 ntBASIC28.62■■■□□ 2.17
PDE6BP35913 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
PDE6BP35913 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC28.61■■■□□ 2.17
PDE6BP35913 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC28.61■■■□□ 2.17
PDE6BP35913 AC034268.1-201ENST00000441047 882 ntBASIC28.61■■■□□ 2.17
PDE6BP35913 AC090192.1-201ENST00000517740 490 ntBASIC28.61■■■□□ 2.17
PDE6BP35913 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
PDE6BP35913 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
PDE6BP35913 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
PDE6BP35913 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC28.6■■■□□ 2.17
PDE6BP35913 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
PDE6BP35913 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
PDE6BP35913 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC28.6■■■□□ 2.17
PDE6BP35913 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
PDE6BP35913 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
PDE6BP35913 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC28.59■■■□□ 2.17
PDE6BP35913 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
PDE6BP35913 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
PDE6BP35913 GRAMD4P2-201ENST00000423297 1097 ntBASIC28.59■■■□□ 2.17
PDE6BP35913 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC28.59■■■□□ 2.17
PDE6BP35913 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC28.59■■■□□ 2.17
PDE6BP35913 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
PDE6BP35913 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
PDE6BP35913 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC28.58■■■□□ 2.17
PDE6BP35913 ASB1-202ENST00000409297 878 ntTSL 5 BASIC28.58■■■□□ 2.17
PDE6BP35913 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
PDE6BP35913 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC28.58■■■□□ 2.17
PDE6BP35913 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
PDE6BP35913 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC28.58■■■□□ 2.17
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms