Protein–RNA interactions for Protein: P24821

TNC, Tenascin, humanhuman

Predictions only

Length 2,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNCP24821 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TNCP24821 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TNCP24821 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC18.42■□□□□ 0.54
TNCP24821 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
TNCP24821 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
TNCP24821 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
TNCP24821 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC18.41■□□□□ 0.54
TNCP24821 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TNCP24821 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC18.41■□□□□ 0.54
TNCP24821 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC18.41■□□□□ 0.54
TNCP24821 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC18.41■□□□□ 0.54
TNCP24821 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC18.41■□□□□ 0.54
TNCP24821 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TNCP24821 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TNCP24821 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
TNCP24821 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TNCP24821 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TNCP24821 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TNCP24821 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC18.4■□□□□ 0.54
TNCP24821 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC18.4■□□□□ 0.54
TNCP24821 AL033527.3-201ENST00000566366 1196 ntBASIC18.4■□□□□ 0.54
TNCP24821 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TNCP24821 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TNCP24821 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TNCP24821 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TNCP24821 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TNCP24821 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TNCP24821 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TNCP24821 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TNCP24821 EI24-213ENST00000618552 1747 ntTSL 5 BASIC18.39■□□□□ 0.54
TNCP24821 MIR4281-201ENST00000580852 62 ntBASIC18.39■□□□□ 0.54
TNCP24821 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TNCP24821 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
TNCP24821 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
TNCP24821 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
TNCP24821 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TNCP24821 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TNCP24821 MIR4508-201ENST00000584178 70 ntBASIC18.39■□□□□ 0.53
TNCP24821 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TNCP24821 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TNCP24821 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TNCP24821 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
TNCP24821 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TNCP24821 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC18.38■□□□□ 0.53
TNCP24821 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TNCP24821 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TNCP24821 GUK1-208ENST00000366728 842 ntTSL 2 BASIC18.38■□□□□ 0.53
TNCP24821 LONRF2P2-201ENST00000439212 571 ntBASIC18.38■□□□□ 0.53
TNCP24821 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC18.38■□□□□ 0.53
TNCP24821 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
TNCP24821 ME2-208ENST00000638937 2471 ntTSL 5 BASIC18.38■□□□□ 0.53
TNCP24821 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC18.38■□□□□ 0.53
TNCP24821 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TNCP24821 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC18.37■□□□□ 0.53
TNCP24821 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TNCP24821 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TNCP24821 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TNCP24821 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TNCP24821 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
TNCP24821 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TNCP24821 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TNCP24821 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC18.37■□□□□ 0.53
TNCP24821 SSSCA1-AS1-201ENST00000567594 614 ntBASIC18.37■□□□□ 0.53
TNCP24821 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC18.36■□□□□ 0.53
TNCP24821 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TNCP24821 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TNCP24821 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
TNCP24821 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TNCP24821 AC103724.3-201ENST00000564481 992 ntBASIC18.36■□□□□ 0.53
TNCP24821 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TNCP24821 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC18.36■□□□□ 0.53
TNCP24821 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC18.36■□□□□ 0.53
TNCP24821 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
TNCP24821 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
TNCP24821 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TNCP24821 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TNCP24821 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TNCP24821 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
TNCP24821 AC074183.2-201ENST00000623112 922 ntBASIC18.35■□□□□ 0.53
TNCP24821 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
TNCP24821 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TNCP24821 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TNCP24821 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TNCP24821 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TNCP24821 LBH-205ENST00000407930 756 ntTSL 2 BASIC18.35■□□□□ 0.53
TNCP24821 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TNCP24821 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TNCP24821 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TNCP24821 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC18.34■□□□□ 0.53
TNCP24821 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
TNCP24821 AF131216.4-201ENST00000638924 1588 ntBASIC18.34■□□□□ 0.53
TNCP24821 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TNCP24821 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TNCP24821 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
TNCP24821 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TNCP24821 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC18.34■□□□□ 0.53
TNCP24821 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC18.34■□□□□ 0.53
TNCP24821 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
TNCP24821 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TNCP24821 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms