Protein–RNA interactions for Protein: P23634

ATP2B4, Plasma membrane calcium-transporting ATPase 4, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B4P23634 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC28.22■■■□□ 2.11
ATP2B4P23634 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
ATP2B4P23634 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC28.21■■■□□ 2.11
ATP2B4P23634 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
ATP2B4P23634 AF213884.3-201ENST00000563833 479 ntBASIC28.21■■■□□ 2.11
ATP2B4P23634 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC28.21■■■□□ 2.11
ATP2B4P23634 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
ATP2B4P23634 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC28.2■■■□□ 2.11
ATP2B4P23634 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC28.2■■■□□ 2.11
ATP2B4P23634 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC28.2■■■□□ 2.11
ATP2B4P23634 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC28.2■■■□□ 2.11
ATP2B4P23634 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC28.2■■■□□ 2.11
ATP2B4P23634 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC28.2■■■□□ 2.1
ATP2B4P23634 AL022069.1-201ENST00000568025 1636 ntBASIC28.2■■■□□ 2.1
ATP2B4P23634 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
ATP2B4P23634 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
ATP2B4P23634 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
ATP2B4P23634 MIR939-201ENST00000401314 82 ntBASIC28.19■■■□□ 2.1
ATP2B4P23634 LGR4-203ENST00000480977 492 ntTSL 2 BASIC28.19■■■□□ 2.1
ATP2B4P23634 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC28.19■■■□□ 2.1
ATP2B4P23634 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC28.19■■■□□ 2.1
ATP2B4P23634 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC28.19■■■□□ 2.1
ATP2B4P23634 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC28.19■■■□□ 2.1
ATP2B4P23634 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC28.19■■■□□ 2.1
ATP2B4P23634 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC28.18■■■□□ 2.1
ATP2B4P23634 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
ATP2B4P23634 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
ATP2B4P23634 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC28.18■■■□□ 2.1
ATP2B4P23634 AP001330.3-201ENST00000520123 633 ntBASIC28.18■■■□□ 2.1
ATP2B4P23634 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
ATP2B4P23634 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC28.18■■■□□ 2.1
ATP2B4P23634 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC28.18■■■□□ 2.1
ATP2B4P23634 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC28.18■■■□□ 2.1
ATP2B4P23634 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
ATP2B4P23634 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
ATP2B4P23634 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC28.17■■■□□ 2.1
ATP2B4P23634 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC28.17■■■□□ 2.1
ATP2B4P23634 AC026271.2-201ENST00000428091 497 ntBASIC28.17■■■□□ 2.1
ATP2B4P23634 AC105265.2-201ENST00000467189 838 ntBASIC28.17■■■□□ 2.1
ATP2B4P23634 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
ATP2B4P23634 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
ATP2B4P23634 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
ATP2B4P23634 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC28.17■■■□□ 2.1
ATP2B4P23634 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
ATP2B4P23634 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
ATP2B4P23634 SERBP1P1-201ENST00000396021 1160 ntBASIC28.16■■■□□ 2.1
ATP2B4P23634 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
ATP2B4P23634 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
ATP2B4P23634 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC28.16■■■□□ 2.1
ATP2B4P23634 AC099791.2-201ENST00000605725 427 ntBASIC28.16■■■□□ 2.1
ATP2B4P23634 LSR-205ENST00000427250 1606 ntTSL 2 BASIC28.16■■■□□ 2.1
ATP2B4P23634 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC28.16■■■□□ 2.1
ATP2B4P23634 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC28.15■■■□□ 2.1
ATP2B4P23634 AC009102.2-201ENST00000606772 1639 ntBASIC28.15■■■□□ 2.1
ATP2B4P23634 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC28.15■■■□□ 2.1
ATP2B4P23634 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
ATP2B4P23634 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
ATP2B4P23634 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC28.14■■■□□ 2.1
ATP2B4P23634 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
ATP2B4P23634 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC28.14■■■□□ 2.1
ATP2B4P23634 MIR4767-201ENST00000582827 78 ntBASIC28.14■■■□□ 2.1
ATP2B4P23634 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
ATP2B4P23634 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
ATP2B4P23634 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
ATP2B4P23634 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC28.13■■■□□ 2.09
ATP2B4P23634 PTMA-205ENST00000410064 814 ntTSL 2 BASIC28.13■■■□□ 2.09
ATP2B4P23634 CEBPA-AS1-201ENST00000592982 2198 ntBASIC28.13■■■□□ 2.09
ATP2B4P23634 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC28.12■■■□□ 2.09
ATP2B4P23634 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
ATP2B4P23634 AC091305.1-201ENST00000479476 895 ntBASIC28.12■■■□□ 2.09
ATP2B4P23634 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC28.12■■■□□ 2.09
ATP2B4P23634 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
ATP2B4P23634 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
ATP2B4P23634 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC28.11■■■□□ 2.09
ATP2B4P23634 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
ATP2B4P23634 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC28.11■■■□□ 2.09
ATP2B4P23634 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
ATP2B4P23634 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
ATP2B4P23634 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC28.11■■■□□ 2.09
ATP2B4P23634 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC28.1■■■□□ 2.09
ATP2B4P23634 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC28.1■■■□□ 2.09
ATP2B4P23634 AC091060.1-201ENST00000623524 1766 ntBASIC28.1■■■□□ 2.09
ATP2B4P23634 PTCHD3P2-201ENST00000424937 1205 ntBASIC28.1■■■□□ 2.09
ATP2B4P23634 AL138724.1-201ENST00000606771 1088 ntBASIC28.1■■■□□ 2.09
ATP2B4P23634 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
ATP2B4P23634 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC28.1■■■□□ 2.09
ATP2B4P23634 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
ATP2B4P23634 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
ATP2B4P23634 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
ATP2B4P23634 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
ATP2B4P23634 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
ATP2B4P23634 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC28.08■■■□□ 2.09
ATP2B4P23634 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC28.08■■■□□ 2.09
ATP2B4P23634 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC28.08■■■□□ 2.09
ATP2B4P23634 AC011298.3-201ENST00000615796 283 ntBASIC28.08■■■□□ 2.09
ATP2B4P23634 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.08
ATP2B4P23634 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
ATP2B4P23634 RBM38-205ENST00000440234 686 ntTSL 2 BASIC28.07■■■□□ 2.08
ATP2B4P23634 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
ATP2B4P23634 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC28.07■■■□□ 2.08
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms