Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.09■□□□□ 0.81
RAB3BP20337 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RAB3BP20337 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
RAB3BP20337 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
RAB3BP20337 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.09■□□□□ 0.81
RAB3BP20337 AL157400.5-201ENST00000507624 621 ntBASIC20.09■□□□□ 0.81
RAB3BP20337 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RAB3BP20337 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC20.09■□□□□ 0.81
RAB3BP20337 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RAB3BP20337 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RAB3BP20337 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.09■□□□□ 0.81
RAB3BP20337 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RAB3BP20337 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RAB3BP20337 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RAB3BP20337 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
RAB3BP20337 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC20.08■□□□□ 0.81
RAB3BP20337 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.08■□□□□ 0.8
RAB3BP20337 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
RAB3BP20337 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
RAB3BP20337 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.08■□□□□ 0.8
RAB3BP20337 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.07■□□□□ 0.8
RAB3BP20337 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RAB3BP20337 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.07■□□□□ 0.8
RAB3BP20337 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.07■□□□□ 0.8
RAB3BP20337 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RAB3BP20337 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RAB3BP20337 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RAB3BP20337 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RAB3BP20337 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RAB3BP20337 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RAB3BP20337 DUSP8P3-201ENST00000399571 1760 ntBASIC20.06■□□□□ 0.8
RAB3BP20337 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RAB3BP20337 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RAB3BP20337 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC20.06■□□□□ 0.8
RAB3BP20337 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC20.06■□□□□ 0.8
RAB3BP20337 RNF166-209ENST00000567844 633 ntTSL 5 BASIC20.06■□□□□ 0.8
RAB3BP20337 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RAB3BP20337 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RAB3BP20337 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
RAB3BP20337 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
RAB3BP20337 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
RAB3BP20337 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
RAB3BP20337 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RAB3BP20337 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RAB3BP20337 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RAB3BP20337 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RAB3BP20337 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
RAB3BP20337 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RAB3BP20337 C1orf229-201ENST00000623686 2258 ntBASIC20.05■□□□□ 0.8
RAB3BP20337 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RAB3BP20337 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RAB3BP20337 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
RAB3BP20337 AC092068.2-201ENST00000590491 1708 ntBASIC20.05■□□□□ 0.8
RAB3BP20337 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RAB3BP20337 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
RAB3BP20337 SMPD5-203ENST00000639008 1464 ntBASIC20.04■□□□□ 0.8
RAB3BP20337 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
RAB3BP20337 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RAB3BP20337 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RAB3BP20337 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
RAB3BP20337 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC20.03■□□□□ 0.8
RAB3BP20337 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
RAB3BP20337 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RAB3BP20337 MOB2-207ENST00000614710 705 ntTSL 5 BASIC20.03■□□□□ 0.8
RAB3BP20337 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RAB3BP20337 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RAB3BP20337 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
RAB3BP20337 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
RAB3BP20337 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RAB3BP20337 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RAB3BP20337 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.02■□□□□ 0.8
RAB3BP20337 CR559946.2-201ENST00000623684 991 ntBASIC20.02■□□□□ 0.8
RAB3BP20337 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.02■□□□□ 0.8
RAB3BP20337 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RAB3BP20337 LINC00526-201ENST00000581067 1875 ntBASIC20.02■□□□□ 0.8
RAB3BP20337 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.02■□□□□ 0.8
RAB3BP20337 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RAB3BP20337 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
RAB3BP20337 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.79
RAB3BP20337 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
RAB3BP20337 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.02■□□□□ 0.79
RAB3BP20337 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RAB3BP20337 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RAB3BP20337 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
RAB3BP20337 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RAB3BP20337 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RAB3BP20337 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RAB3BP20337 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
RAB3BP20337 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RAB3BP20337 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RAB3BP20337 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.01■□□□□ 0.79
RAB3BP20337 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RAB3BP20337 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
RAB3BP20337 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20■□□□□ 0.79
RAB3BP20337 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
RAB3BP20337 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20■□□□□ 0.79
RAB3BP20337 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
RAB3BP20337 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RAB3BP20337 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
RAB3BP20337 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms