Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.19■□□□□ 0.98
UBL4AP11441 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
UBL4AP11441 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
UBL4AP11441 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
UBL4AP11441 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.18■□□□□ 0.98
UBL4AP11441 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
UBL4AP11441 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.18■□□□□ 0.98
UBL4AP11441 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
UBL4AP11441 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.18■□□□□ 0.98
UBL4AP11441 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC21.18■□□□□ 0.98
UBL4AP11441 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
UBL4AP11441 AC133561.1-201ENST00000568600 2415 ntBASIC21.18■□□□□ 0.98
UBL4AP11441 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
UBL4AP11441 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
UBL4AP11441 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
UBL4AP11441 AC103724.3-201ENST00000564481 992 ntBASIC21.17■□□□□ 0.98
UBL4AP11441 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
UBL4AP11441 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
UBL4AP11441 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
UBL4AP11441 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.17■□□□□ 0.98
UBL4AP11441 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
UBL4AP11441 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
UBL4AP11441 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC21.16■□□□□ 0.98
UBL4AP11441 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.16■□□□□ 0.98
UBL4AP11441 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
UBL4AP11441 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.16■□□□□ 0.98
UBL4AP11441 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.16■□□□□ 0.98
UBL4AP11441 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
UBL4AP11441 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
UBL4AP11441 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
UBL4AP11441 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.15■□□□□ 0.98
UBL4AP11441 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
UBL4AP11441 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.15■□□□□ 0.98
UBL4AP11441 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
UBL4AP11441 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
UBL4AP11441 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
UBL4AP11441 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
UBL4AP11441 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC21.14■□□□□ 0.97
UBL4AP11441 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
UBL4AP11441 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
UBL4AP11441 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
UBL4AP11441 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.13■□□□□ 0.97
UBL4AP11441 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
UBL4AP11441 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.13■□□□□ 0.97
UBL4AP11441 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC21.13■□□□□ 0.97
UBL4AP11441 AL031848.2-201ENST00000607670 837 ntBASIC21.13■□□□□ 0.97
UBL4AP11441 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC21.13■□□□□ 0.97
UBL4AP11441 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
UBL4AP11441 AC004812.2-201ENST00000611079 2094 ntBASIC21.13■□□□□ 0.97
UBL4AP11441 AL161729.1-201ENST00000604104 1402 ntBASIC21.12■□□□□ 0.97
UBL4AP11441 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
UBL4AP11441 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
UBL4AP11441 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
UBL4AP11441 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
UBL4AP11441 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
UBL4AP11441 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC21.12■□□□□ 0.97
UBL4AP11441 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
UBL4AP11441 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
UBL4AP11441 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
UBL4AP11441 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
UBL4AP11441 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
UBL4AP11441 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
UBL4AP11441 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
UBL4AP11441 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC21.11■□□□□ 0.97
UBL4AP11441 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.11■□□□□ 0.97
UBL4AP11441 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
UBL4AP11441 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
UBL4AP11441 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
UBL4AP11441 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
UBL4AP11441 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
UBL4AP11441 AL022069.1-201ENST00000568025 1636 ntBASIC21.11■□□□□ 0.97
UBL4AP11441 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.1■□□□□ 0.97
UBL4AP11441 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
UBL4AP11441 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
UBL4AP11441 TK2-216ENST00000564917 1156 ntTSL 3 BASIC21.1■□□□□ 0.97
UBL4AP11441 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.1■□□□□ 0.97
UBL4AP11441 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.1■□□□□ 0.97
UBL4AP11441 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
UBL4AP11441 AF131216.4-201ENST00000638924 1588 ntBASIC21.1■□□□□ 0.97
UBL4AP11441 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
UBL4AP11441 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
UBL4AP11441 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
UBL4AP11441 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC21.09■□□□□ 0.97
UBL4AP11441 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.09■□□□□ 0.97
UBL4AP11441 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
UBL4AP11441 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
UBL4AP11441 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
UBL4AP11441 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
UBL4AP11441 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.09■□□□□ 0.97
UBL4AP11441 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
UBL4AP11441 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
UBL4AP11441 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
UBL4AP11441 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
UBL4AP11441 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
UBL4AP11441 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
UBL4AP11441 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
UBL4AP11441 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
UBL4AP11441 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
UBL4AP11441 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
UBL4AP11441 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.08■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms