Protein–RNA interactions for Protein: P0DMR1

HNRNPCL4, Heterogeneous nuclear ribonucleoprotein C-like 4, humanhuman

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPCL4P0DMR1 DUX4L18-201ENST00000553347 1267 ntBASIC21.32■■□□□ 1
HNRNPCL4P0DMR1 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC21.32■■□□□ 1
HNRNPCL4P0DMR1 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
HNRNPCL4P0DMR1 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.32■■□□□ 1
HNRNPCL4P0DMR1 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.32■■□□□ 1
HNRNPCL4P0DMR1 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.32■■□□□ 1
HNRNPCL4P0DMR1 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
HNRNPCL4P0DMR1 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
HNRNPCL4P0DMR1 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
HNRNPCL4P0DMR1 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
HNRNPCL4P0DMR1 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
HNRNPCL4P0DMR1 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.31■■□□□ 1
HNRNPCL4P0DMR1 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC21.31■■□□□ 1
HNRNPCL4P0DMR1 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
HNRNPCL4P0DMR1 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.31■■□□□ 1
HNRNPCL4P0DMR1 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.31■■□□□ 1
HNRNPCL4P0DMR1 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.31■■□□□ 1
HNRNPCL4P0DMR1 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
HNRNPCL4P0DMR1 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.31■■□□□ 1
HNRNPCL4P0DMR1 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.3■■□□□ 1
HNRNPCL4P0DMR1 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
HNRNPCL4P0DMR1 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
HNRNPCL4P0DMR1 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
HNRNPCL4P0DMR1 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.3■■□□□ 1
HNRNPCL4P0DMR1 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.3■■□□□ 1
HNRNPCL4P0DMR1 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.3■■□□□ 1
HNRNPCL4P0DMR1 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
HNRNPCL4P0DMR1 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
HNRNPCL4P0DMR1 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
HNRNPCL4P0DMR1 AL022069.1-201ENST00000568025 1636 ntBASIC21.29■■□□□ 1
HNRNPCL4P0DMR1 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
HNRNPCL4P0DMR1 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.29■■□□□ 1
HNRNPCL4P0DMR1 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
HNRNPCL4P0DMR1 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
HNRNPCL4P0DMR1 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC21.29■■□□□ 1
HNRNPCL4P0DMR1 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.29■■□□□ 1
HNRNPCL4P0DMR1 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
HNRNPCL4P0DMR1 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HNRNPCL4P0DMR1 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HNRNPCL4P0DMR1 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.28■■□□□ 1
HNRNPCL4P0DMR1 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
HNRNPCL4P0DMR1 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
HNRNPCL4P0DMR1 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC21.27■■□□□ 1
HNRNPCL4P0DMR1 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
HNRNPCL4P0DMR1 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
HNRNPCL4P0DMR1 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
HNRNPCL4P0DMR1 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
HNRNPCL4P0DMR1 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC21.27■■□□□ 1
HNRNPCL4P0DMR1 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC21.27■■□□□ 1
HNRNPCL4P0DMR1 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC21.27■■□□□ 1
HNRNPCL4P0DMR1 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.27■■□□□ 1
HNRNPCL4P0DMR1 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.27■■□□□ 1
HNRNPCL4P0DMR1 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
HNRNPCL4P0DMR1 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.27■■□□□ 1
HNRNPCL4P0DMR1 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.27■■□□□ 1
HNRNPCL4P0DMR1 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
HNRNPCL4P0DMR1 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
HNRNPCL4P0DMR1 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HNRNPCL4P0DMR1 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.26■□□□□ 0.99
HNRNPCL4P0DMR1 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
HNRNPCL4P0DMR1 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
HNRNPCL4P0DMR1 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.26■□□□□ 0.99
HNRNPCL4P0DMR1 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HNRNPCL4P0DMR1 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
HNRNPCL4P0DMR1 AC074183.2-201ENST00000623112 922 ntBASIC21.26■□□□□ 0.99
HNRNPCL4P0DMR1 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HNRNPCL4P0DMR1 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.26■□□□□ 0.99
HNRNPCL4P0DMR1 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HNRNPCL4P0DMR1 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.26■□□□□ 0.99
HNRNPCL4P0DMR1 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HNRNPCL4P0DMR1 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.26■□□□□ 0.99
HNRNPCL4P0DMR1 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
HNRNPCL4P0DMR1 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.25■□□□□ 0.99
HNRNPCL4P0DMR1 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
HNRNPCL4P0DMR1 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HNRNPCL4P0DMR1 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
HNRNPCL4P0DMR1 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC21.25■□□□□ 0.99
HNRNPCL4P0DMR1 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HNRNPCL4P0DMR1 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.25■□□□□ 0.99
HNRNPCL4P0DMR1 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.25■□□□□ 0.99
HNRNPCL4P0DMR1 BHLHE23-202ENST00000612929 1109 ntBASIC21.25■□□□□ 0.99
HNRNPCL4P0DMR1 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.25■□□□□ 0.99
HNRNPCL4P0DMR1 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HNRNPCL4P0DMR1 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HNRNPCL4P0DMR1 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
HNRNPCL4P0DMR1 IDNK-201ENST00000376417 511 ntTSL 5 BASIC21.24■□□□□ 0.99
HNRNPCL4P0DMR1 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HNRNPCL4P0DMR1 AC004987.1-201ENST00000428627 508 ntBASIC21.24■□□□□ 0.99
HNRNPCL4P0DMR1 ATP5G2P3-201ENST00000429083 425 ntBASIC21.24■□□□□ 0.99
HNRNPCL4P0DMR1 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC21.24■□□□□ 0.99
HNRNPCL4P0DMR1 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
HNRNPCL4P0DMR1 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HNRNPCL4P0DMR1 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HNRNPCL4P0DMR1 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
HNRNPCL4P0DMR1 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
HNRNPCL4P0DMR1 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HNRNPCL4P0DMR1 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HNRNPCL4P0DMR1 AC012676.1-201ENST00000574705 1949 ntBASIC21.23■□□□□ 0.99
HNRNPCL4P0DMR1 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HNRNPCL4P0DMR1 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms