Protein–RNA interactions for Protein: P06028

GYPB, Glycophorin-B, humanhuman

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GYPBP06028 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
GYPBP06028 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
GYPBP06028 AC090877.2-201ENST00000558441 1738 ntBASIC20.6■□□□□ 0.89
GYPBP06028 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
GYPBP06028 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
GYPBP06028 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
GYPBP06028 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
GYPBP06028 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
GYPBP06028 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
GYPBP06028 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
GYPBP06028 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.59■□□□□ 0.89
GYPBP06028 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
GYPBP06028 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
GYPBP06028 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.59■□□□□ 0.89
GYPBP06028 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC20.59■□□□□ 0.89
GYPBP06028 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
GYPBP06028 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
GYPBP06028 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
GYPBP06028 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC20.58■□□□□ 0.89
GYPBP06028 DUX4L9-201ENST00000449051 1259 ntBASIC20.58■□□□□ 0.89
GYPBP06028 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
GYPBP06028 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.58■□□□□ 0.89
GYPBP06028 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.58■□□□□ 0.89
GYPBP06028 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
GYPBP06028 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
GYPBP06028 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC20.58■□□□□ 0.88
GYPBP06028 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
GYPBP06028 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
GYPBP06028 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
GYPBP06028 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
GYPBP06028 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
GYPBP06028 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
GYPBP06028 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
GYPBP06028 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
GYPBP06028 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
GYPBP06028 AC087393.1-201ENST00000582896 145 ntBASIC20.57■□□□□ 0.88
GYPBP06028 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC20.57■□□□□ 0.88
GYPBP06028 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
GYPBP06028 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
GYPBP06028 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.57■□□□□ 0.88
GYPBP06028 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
GYPBP06028 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
GYPBP06028 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
GYPBP06028 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GYPBP06028 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
GYPBP06028 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
GYPBP06028 MIR6765-201ENST00000614092 87 ntBASIC20.56■□□□□ 0.88
GYPBP06028 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
GYPBP06028 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC20.56■□□□□ 0.88
GYPBP06028 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
GYPBP06028 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GYPBP06028 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GYPBP06028 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GYPBP06028 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.56■□□□□ 0.88
GYPBP06028 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
GYPBP06028 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.56■□□□□ 0.88
GYPBP06028 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GYPBP06028 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
GYPBP06028 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
GYPBP06028 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GYPBP06028 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
GYPBP06028 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
GYPBP06028 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
GYPBP06028 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GYPBP06028 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GYPBP06028 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
GYPBP06028 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
GYPBP06028 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GYPBP06028 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
GYPBP06028 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
GYPBP06028 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.54■□□□□ 0.88
GYPBP06028 IDNK-203ENST00000405990 629 ntTSL 2 BASIC20.54■□□□□ 0.88
GYPBP06028 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC20.54■□□□□ 0.88
GYPBP06028 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
GYPBP06028 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.54■□□□□ 0.88
GYPBP06028 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GYPBP06028 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GYPBP06028 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
GYPBP06028 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.53■□□□□ 0.88
GYPBP06028 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GYPBP06028 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GYPBP06028 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC20.53■□□□□ 0.88
GYPBP06028 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GYPBP06028 AL592295.1-201ENST00000400984 884 ntBASIC20.53■□□□□ 0.88
GYPBP06028 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
GYPBP06028 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
GYPBP06028 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
GYPBP06028 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
GYPBP06028 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.52■□□□□ 0.88
GYPBP06028 RARRES2P2-201ENST00000394842 485 ntBASIC20.52■□□□□ 0.88
GYPBP06028 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC20.52■□□□□ 0.88
GYPBP06028 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.52■□□□□ 0.88
GYPBP06028 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
GYPBP06028 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.52■□□□□ 0.88
GYPBP06028 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
GYPBP06028 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC20.52■□□□□ 0.87
GYPBP06028 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
GYPBP06028 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
GYPBP06028 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
GYPBP06028 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms