Protein–RNA interactions for Protein: O75556

SCGB2A1, Mammaglobin-B, humanhuman

Predictions only

Length 95 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCGB2A1O75556 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SCGB2A1O75556 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC18.06■□□□□ 0.48
SCGB2A1O75556 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SCGB2A1O75556 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC18.06■□□□□ 0.48
SCGB2A1O75556 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SCGB2A1O75556 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC18.06■□□□□ 0.48
SCGB2A1O75556 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
SCGB2A1O75556 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SCGB2A1O75556 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
SCGB2A1O75556 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC18.06■□□□□ 0.48
SCGB2A1O75556 HLA-L-211ENST00000482052 1765 ntBASIC18.06■□□□□ 0.48
SCGB2A1O75556 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
SCGB2A1O75556 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
SCGB2A1O75556 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
SCGB2A1O75556 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SCGB2A1O75556 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SCGB2A1O75556 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC18.05■□□□□ 0.48
SCGB2A1O75556 RARA-203ENST00000394086 2008 ntTSL 2 BASIC18.05■□□□□ 0.48
SCGB2A1O75556 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SCGB2A1O75556 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
SCGB2A1O75556 AC090877.2-201ENST00000558441 1738 ntBASIC18.05■□□□□ 0.48
SCGB2A1O75556 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SCGB2A1O75556 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SCGB2A1O75556 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SCGB2A1O75556 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.05■□□□□ 0.48
SCGB2A1O75556 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SCGB2A1O75556 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SCGB2A1O75556 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
SCGB2A1O75556 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SCGB2A1O75556 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SCGB2A1O75556 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SCGB2A1O75556 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SCGB2A1O75556 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
SCGB2A1O75556 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SCGB2A1O75556 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SCGB2A1O75556 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SCGB2A1O75556 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SCGB2A1O75556 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
SCGB2A1O75556 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
SCGB2A1O75556 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC18.04■□□□□ 0.48
SCGB2A1O75556 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SCGB2A1O75556 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SCGB2A1O75556 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
SCGB2A1O75556 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SCGB2A1O75556 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
SCGB2A1O75556 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC18.04■□□□□ 0.48
SCGB2A1O75556 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
SCGB2A1O75556 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SCGB2A1O75556 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
SCGB2A1O75556 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
SCGB2A1O75556 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SCGB2A1O75556 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
SCGB2A1O75556 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
SCGB2A1O75556 HSD17B1P1-201ENST00000590052 955 ntBASIC18.03■□□□□ 0.48
SCGB2A1O75556 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC18.03■□□□□ 0.48
SCGB2A1O75556 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SCGB2A1O75556 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
SCGB2A1O75556 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SCGB2A1O75556 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
SCGB2A1O75556 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SCGB2A1O75556 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SCGB2A1O75556 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC18.02■□□□□ 0.48
SCGB2A1O75556 AC139795.1-202ENST00000500444 432 ntBASIC18.02■□□□□ 0.48
SCGB2A1O75556 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC18.02■□□□□ 0.48
SCGB2A1O75556 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
SCGB2A1O75556 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SCGB2A1O75556 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
SCGB2A1O75556 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC18.01■□□□□ 0.47
SCGB2A1O75556 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
SCGB2A1O75556 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
SCGB2A1O75556 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
SCGB2A1O75556 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SCGB2A1O75556 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC18.01■□□□□ 0.47
SCGB2A1O75556 DUX4L9-201ENST00000449051 1259 ntBASIC18.01■□□□□ 0.47
SCGB2A1O75556 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC18.01■□□□□ 0.47
SCGB2A1O75556 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC18.01■□□□□ 0.47
SCGB2A1O75556 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
SCGB2A1O75556 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
SCGB2A1O75556 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SCGB2A1O75556 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC18.01■□□□□ 0.47
SCGB2A1O75556 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SCGB2A1O75556 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC18■□□□□ 0.47
SCGB2A1O75556 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC18■□□□□ 0.47
SCGB2A1O75556 AC022616.5-201ENST00000518796 181 ntBASIC18■□□□□ 0.47
SCGB2A1O75556 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
SCGB2A1O75556 AC011551.1-201ENST00000614101 683 ntBASIC18■□□□□ 0.47
SCGB2A1O75556 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SCGB2A1O75556 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SCGB2A1O75556 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC18■□□□□ 0.47
SCGB2A1O75556 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
SCGB2A1O75556 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SCGB2A1O75556 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC18■□□□□ 0.47
SCGB2A1O75556 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
SCGB2A1O75556 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC17.99■□□□□ 0.47
SCGB2A1O75556 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
SCGB2A1O75556 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
SCGB2A1O75556 TMEM202-AS1-202ENST00000565181 2325 ntBASIC17.99■□□□□ 0.47
SCGB2A1O75556 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SCGB2A1O75556 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
SCGB2A1O75556 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms