Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.37■■□□□ 1.01
HCN1O60741 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HCN1O60741 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HCN1O60741 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
HCN1O60741 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
HCN1O60741 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
HCN1O60741 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.36■■□□□ 1.01
HCN1O60741 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
HCN1O60741 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HCN1O60741 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC21.36■■□□□ 1.01
HCN1O60741 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC21.36■■□□□ 1.01
HCN1O60741 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC21.36■■□□□ 1.01
HCN1O60741 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HCN1O60741 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HCN1O60741 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
HCN1O60741 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HCN1O60741 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
HCN1O60741 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HCN1O60741 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
HCN1O60741 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC21.35■■□□□ 1.01
HCN1O60741 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
HCN1O60741 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
HCN1O60741 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
HCN1O60741 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
HCN1O60741 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
HCN1O60741 SSSCA1-AS1-201ENST00000567594 614 ntBASIC21.35■■□□□ 1.01
HCN1O60741 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC21.35■■□□□ 1.01
HCN1O60741 LINC00543-201ENST00000567234 1845 ntBASIC21.34■■□□□ 1.01
HCN1O60741 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC21.34■■□□□ 1.01
HCN1O60741 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.34■■□□□ 1.01
HCN1O60741 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.34■■□□□ 1.01
HCN1O60741 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
HCN1O60741 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC21.34■■□□□ 1.01
HCN1O60741 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
HCN1O60741 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
HCN1O60741 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
HCN1O60741 MIR4787-201ENST00000607364 84 ntBASIC21.34■■□□□ 1.01
HCN1O60741 AC141586.4-201ENST00000624558 1573 ntBASIC21.34■■□□□ 1.01
HCN1O60741 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
HCN1O60741 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
HCN1O60741 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC21.33■■□□□ 1.01
HCN1O60741 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
HCN1O60741 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
HCN1O60741 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
HCN1O60741 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
HCN1O60741 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
HCN1O60741 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC21.33■■□□□ 1.01
HCN1O60741 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.33■■□□□ 1.01
HCN1O60741 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
HCN1O60741 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
HCN1O60741 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.33■■□□□ 1
HCN1O60741 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
HCN1O60741 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC21.32■■□□□ 1
HCN1O60741 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
HCN1O60741 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
HCN1O60741 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
HCN1O60741 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC21.32■■□□□ 1
HCN1O60741 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.32■■□□□ 1
HCN1O60741 AL356441.2-201ENST00000443009 864 ntBASIC21.32■■□□□ 1
HCN1O60741 CREM-229ENST00000474362 1030 ntTSL 2 BASIC21.32■■□□□ 1
HCN1O60741 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21.32■■□□□ 1
HCN1O60741 MIR4281-201ENST00000580852 62 ntBASIC21.32■■□□□ 1
HCN1O60741 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
HCN1O60741 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
HCN1O60741 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
HCN1O60741 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
HCN1O60741 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.32■■□□□ 1
HCN1O60741 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
HCN1O60741 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
HCN1O60741 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.31■■□□□ 1
HCN1O60741 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC21.31■■□□□ 1
HCN1O60741 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.31■■□□□ 1
HCN1O60741 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.31■■□□□ 1
HCN1O60741 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.31■■□□□ 1
HCN1O60741 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21.31■■□□□ 1
HCN1O60741 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC21.31■■□□□ 1
HCN1O60741 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC21.31■■□□□ 1
HCN1O60741 MIR6089-201ENST00000616698 64 ntBASIC21.31■■□□□ 1
HCN1O60741 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.31■■□□□ 1
HCN1O60741 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC21.31■■□□□ 1
HCN1O60741 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
HCN1O60741 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC21.3■■□□□ 1
HCN1O60741 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC21.3■■□□□ 1
HCN1O60741 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
HCN1O60741 FOXO3B-201ENST00000395675 1928 ntBASIC21.3■■□□□ 1
HCN1O60741 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
HCN1O60741 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC21.3■■□□□ 1
HCN1O60741 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
HCN1O60741 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
HCN1O60741 AC021242.3-201ENST00000607598 1377 ntBASIC21.3■■□□□ 1
HCN1O60741 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
HCN1O60741 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
HCN1O60741 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
HCN1O60741 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC21.29■■□□□ 1
HCN1O60741 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC21.29■■□□□ 1
HCN1O60741 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.29■■□□□ 1
HCN1O60741 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.29■■□□□ 1
HCN1O60741 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
HCN1O60741 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC21.28■■□□□ 1
HCN1O60741 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms