Protein–RNA interactions for Protein: O43307

ARHGEF9, Rho guanine nucleotide exchange factor 9, humanhuman

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF9O43307 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
ARHGEF9O43307 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
ARHGEF9O43307 AC131212.1-201ENST00000613771 668 ntBASIC21.09■□□□□ 0.97
ARHGEF9O43307 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC21.09■□□□□ 0.97
ARHGEF9O43307 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC21.09■□□□□ 0.97
ARHGEF9O43307 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC21.09■□□□□ 0.97
ARHGEF9O43307 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ARHGEF9O43307 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
ARHGEF9O43307 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC21.08■□□□□ 0.97
ARHGEF9O43307 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
ARHGEF9O43307 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ARHGEF9O43307 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ARHGEF9O43307 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ARHGEF9O43307 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ARHGEF9O43307 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ARHGEF9O43307 KRT18P10-201ENST00000388836 1287 ntBASIC21.08■□□□□ 0.97
ARHGEF9O43307 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC21.08■□□□□ 0.97
ARHGEF9O43307 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.08■□□□□ 0.97
ARHGEF9O43307 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.97
ARHGEF9O43307 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.08■□□□□ 0.96
ARHGEF9O43307 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ARHGEF9O43307 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
ARHGEF9O43307 HES6-204ENST00000409182 863 ntTSL 2 BASIC21.07■□□□□ 0.96
ARHGEF9O43307 AC009299.2-201ENST00000482477 511 ntBASIC21.07■□□□□ 0.96
ARHGEF9O43307 MIR6765-201ENST00000614092 87 ntBASIC21.07■□□□□ 0.96
ARHGEF9O43307 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
ARHGEF9O43307 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.07■□□□□ 0.96
ARHGEF9O43307 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.06■□□□□ 0.96
ARHGEF9O43307 MTURN-203ENST00000409688 843 ntTSL 2 BASIC21.06■□□□□ 0.96
ARHGEF9O43307 LINC01124-201ENST00000409786 2117 ntBASIC21.06■□□□□ 0.96
ARHGEF9O43307 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC21.06■□□□□ 0.96
ARHGEF9O43307 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ARHGEF9O43307 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.06■□□□□ 0.96
ARHGEF9O43307 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
ARHGEF9O43307 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.06■□□□□ 0.96
ARHGEF9O43307 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ARHGEF9O43307 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ARHGEF9O43307 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.05■□□□□ 0.96
ARHGEF9O43307 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
ARHGEF9O43307 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC21.05■□□□□ 0.96
ARHGEF9O43307 AC018755.3-202ENST00000596210 929 ntBASIC21.05■□□□□ 0.96
ARHGEF9O43307 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.05■□□□□ 0.96
ARHGEF9O43307 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ARHGEF9O43307 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ARHGEF9O43307 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ARHGEF9O43307 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ARHGEF9O43307 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
ARHGEF9O43307 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC21.04■□□□□ 0.96
ARHGEF9O43307 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ARHGEF9O43307 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ARHGEF9O43307 AC068473.5-201ENST00000616428 2072 ntBASIC21.04■□□□□ 0.96
ARHGEF9O43307 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ARHGEF9O43307 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ARHGEF9O43307 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
ARHGEF9O43307 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ARHGEF9O43307 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
ARHGEF9O43307 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC21.03■□□□□ 0.96
ARHGEF9O43307 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ARHGEF9O43307 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.03■□□□□ 0.96
ARHGEF9O43307 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ARHGEF9O43307 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ARHGEF9O43307 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ARHGEF9O43307 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ARHGEF9O43307 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC21.02■□□□□ 0.96
ARHGEF9O43307 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC21.02■□□□□ 0.96
ARHGEF9O43307 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
ARHGEF9O43307 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
ARHGEF9O43307 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.02■□□□□ 0.96
ARHGEF9O43307 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
ARHGEF9O43307 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ARHGEF9O43307 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ARHGEF9O43307 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ARHGEF9O43307 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ARHGEF9O43307 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC21.01■□□□□ 0.95
ARHGEF9O43307 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC21.01■□□□□ 0.95
ARHGEF9O43307 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC21.01■□□□□ 0.95
ARHGEF9O43307 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ARHGEF9O43307 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ARHGEF9O43307 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ARHGEF9O43307 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ARHGEF9O43307 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
ARHGEF9O43307 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ARHGEF9O43307 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ARHGEF9O43307 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21■□□□□ 0.95
ARHGEF9O43307 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21■□□□□ 0.95
ARHGEF9O43307 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21■□□□□ 0.95
ARHGEF9O43307 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC21■□□□□ 0.95
ARHGEF9O43307 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ARHGEF9O43307 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC21■□□□□ 0.95
ARHGEF9O43307 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC21■□□□□ 0.95
ARHGEF9O43307 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.99■□□□□ 0.95
ARHGEF9O43307 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ARHGEF9O43307 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ARHGEF9O43307 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
ARHGEF9O43307 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ARHGEF9O43307 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.99■□□□□ 0.95
ARHGEF9O43307 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ARHGEF9O43307 FOXO3B-201ENST00000395675 1928 ntBASIC20.99■□□□□ 0.95
ARHGEF9O43307 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ARHGEF9O43307 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms