Protein–RNA interactions for Protein: O00241

SIRPB1, Signal-regulatory protein beta-1, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB1O00241 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SIRPB1O00241 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SIRPB1O00241 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SIRPB1O00241 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC19.36■□□□□ 0.69
SIRPB1O00241 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SIRPB1O00241 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SIRPB1O00241 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
SIRPB1O00241 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC19.36■□□□□ 0.69
SIRPB1O00241 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC19.36■□□□□ 0.69
SIRPB1O00241 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SIRPB1O00241 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SIRPB1O00241 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SIRPB1O00241 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
SIRPB1O00241 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SIRPB1O00241 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SIRPB1O00241 IDNK-201ENST00000376417 511 ntTSL 5 BASIC19.35■□□□□ 0.69
SIRPB1O00241 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SIRPB1O00241 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC19.35■□□□□ 0.69
SIRPB1O00241 GAK-223ENST00000628912 497 ntTSL 5 BASIC19.35■□□□□ 0.69
SIRPB1O00241 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SIRPB1O00241 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SIRPB1O00241 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SIRPB1O00241 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SIRPB1O00241 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SIRPB1O00241 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC19.34■□□□□ 0.69
SIRPB1O00241 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
SIRPB1O00241 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
SIRPB1O00241 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC19.34■□□□□ 0.69
SIRPB1O00241 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC19.34■□□□□ 0.69
SIRPB1O00241 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC19.34■□□□□ 0.69
SIRPB1O00241 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC19.34■□□□□ 0.69
SIRPB1O00241 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC19.34■□□□□ 0.69
SIRPB1O00241 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC19.34■□□□□ 0.69
SIRPB1O00241 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
SIRPB1O00241 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
SIRPB1O00241 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SIRPB1O00241 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC19.33■□□□□ 0.68
SIRPB1O00241 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC19.33■□□□□ 0.68
SIRPB1O00241 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC19.33■□□□□ 0.68
SIRPB1O00241 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC19.33■□□□□ 0.68
SIRPB1O00241 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC19.33■□□□□ 0.68
SIRPB1O00241 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC19.33■□□□□ 0.68
SIRPB1O00241 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SIRPB1O00241 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.68
SIRPB1O00241 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SIRPB1O00241 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SIRPB1O00241 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SIRPB1O00241 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
SIRPB1O00241 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
SIRPB1O00241 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SIRPB1O00241 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SIRPB1O00241 AC120024.1-201ENST00000562672 995 ntBASIC19.32■□□□□ 0.68
SIRPB1O00241 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SIRPB1O00241 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SIRPB1O00241 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SIRPB1O00241 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SIRPB1O00241 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SIRPB1O00241 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SIRPB1O00241 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SIRPB1O00241 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC19.31■□□□□ 0.68
SIRPB1O00241 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC19.31■□□□□ 0.68
SIRPB1O00241 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SIRPB1O00241 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC19.31■□□□□ 0.68
SIRPB1O00241 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SIRPB1O00241 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
SIRPB1O00241 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SIRPB1O00241 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
SIRPB1O00241 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
SIRPB1O00241 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SIRPB1O00241 CASK-201ENST00000378154 2494 ntTSL 5 BASIC19.3■□□□□ 0.68
SIRPB1O00241 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
SIRPB1O00241 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC19.3■□□□□ 0.68
SIRPB1O00241 THA1P-201ENST00000590384 1145 ntBASIC19.3■□□□□ 0.68
SIRPB1O00241 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SIRPB1O00241 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SIRPB1O00241 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SIRPB1O00241 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SIRPB1O00241 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
SIRPB1O00241 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.29■□□□□ 0.68
SIRPB1O00241 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
SIRPB1O00241 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
SIRPB1O00241 KRT8P33-201ENST00000508125 1423 ntBASIC19.29■□□□□ 0.68
SIRPB1O00241 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
SIRPB1O00241 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SIRPB1O00241 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC19.29■□□□□ 0.68
SIRPB1O00241 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SIRPB1O00241 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SIRPB1O00241 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SIRPB1O00241 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
SIRPB1O00241 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SIRPB1O00241 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SIRPB1O00241 RARA-203ENST00000394086 2008 ntTSL 2 BASIC19.29■□□□□ 0.68
SIRPB1O00241 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SIRPB1O00241 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SIRPB1O00241 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC19.28■□□□□ 0.68
SIRPB1O00241 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC19.28■□□□□ 0.68
SIRPB1O00241 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SIRPB1O00241 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
SIRPB1O00241 AL022069.1-201ENST00000568025 1636 ntBASIC19.28■□□□□ 0.68
SIRPB1O00241 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms