Protein–RNA interactions for Protein: A6NLX3

SPDYE4, Speedy protein E4, humanhuman

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE4A6NLX3 CREM-229ENST00000474362 1030 ntTSL 2 BASIC25.55■■□□□ 1.68
SPDYE4A6NLX3 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC25.55■■□□□ 1.68
SPDYE4A6NLX3 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC25.54■■□□□ 1.68
SPDYE4A6NLX3 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC25.54■■□□□ 1.68
SPDYE4A6NLX3 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC25.54■■□□□ 1.68
SPDYE4A6NLX3 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
SPDYE4A6NLX3 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
SPDYE4A6NLX3 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC25.54■■□□□ 1.68
SPDYE4A6NLX3 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC25.54■■□□□ 1.68
SPDYE4A6NLX3 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC25.54■■□□□ 1.68
SPDYE4A6NLX3 MIR4787-201ENST00000607364 84 ntBASIC25.54■■□□□ 1.68
SPDYE4A6NLX3 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
SPDYE4A6NLX3 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC25.54■■□□□ 1.68
SPDYE4A6NLX3 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
SPDYE4A6NLX3 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
SPDYE4A6NLX3 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC25.54■■□□□ 1.68
SPDYE4A6NLX3 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
SPDYE4A6NLX3 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC25.54■■□□□ 1.68
SPDYE4A6NLX3 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC25.53■■□□□ 1.68
SPDYE4A6NLX3 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
SPDYE4A6NLX3 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC25.53■■□□□ 1.68
SPDYE4A6NLX3 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC25.53■■□□□ 1.68
SPDYE4A6NLX3 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC25.53■■□□□ 1.68
SPDYE4A6NLX3 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
SPDYE4A6NLX3 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
SPDYE4A6NLX3 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
SPDYE4A6NLX3 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC25.53■■□□□ 1.68
SPDYE4A6NLX3 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC25.53■■□□□ 1.68
SPDYE4A6NLX3 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC25.53■■□□□ 1.68
SPDYE4A6NLX3 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC25.53■■□□□ 1.68
SPDYE4A6NLX3 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
SPDYE4A6NLX3 ME2-208ENST00000638937 2471 ntTSL 5 BASIC25.52■■□□□ 1.68
SPDYE4A6NLX3 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC25.52■■□□□ 1.68
SPDYE4A6NLX3 AC022616.5-201ENST00000518796 181 ntBASIC25.52■■□□□ 1.68
SPDYE4A6NLX3 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC25.52■■□□□ 1.68
SPDYE4A6NLX3 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC25.52■■□□□ 1.68
SPDYE4A6NLX3 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC25.52■■□□□ 1.68
SPDYE4A6NLX3 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
SPDYE4A6NLX3 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
SPDYE4A6NLX3 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC25.52■■□□□ 1.68
SPDYE4A6NLX3 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC25.51■■□□□ 1.68
SPDYE4A6NLX3 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC25.51■■□□□ 1.67
SPDYE4A6NLX3 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
SPDYE4A6NLX3 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
SPDYE4A6NLX3 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC25.51■■□□□ 1.67
SPDYE4A6NLX3 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC25.51■■□□□ 1.67
SPDYE4A6NLX3 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC25.5■■□□□ 1.67
SPDYE4A6NLX3 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
SPDYE4A6NLX3 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC25.5■■□□□ 1.67
SPDYE4A6NLX3 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC25.5■■□□□ 1.67
SPDYE4A6NLX3 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC25.5■■□□□ 1.67
SPDYE4A6NLX3 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC25.5■■□□□ 1.67
SPDYE4A6NLX3 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
SPDYE4A6NLX3 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
SPDYE4A6NLX3 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
SPDYE4A6NLX3 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
SPDYE4A6NLX3 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
SPDYE4A6NLX3 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC25.49■■□□□ 1.67
SPDYE4A6NLX3 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
SPDYE4A6NLX3 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC25.48■■□□□ 1.67
SPDYE4A6NLX3 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
SPDYE4A6NLX3 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
SPDYE4A6NLX3 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC25.48■■□□□ 1.67
SPDYE4A6NLX3 KRT16P3-201ENST00000439127 1283 ntBASIC25.48■■□□□ 1.67
SPDYE4A6NLX3 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
SPDYE4A6NLX3 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC25.47■■□□□ 1.67
SPDYE4A6NLX3 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
SPDYE4A6NLX3 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC25.47■■□□□ 1.67
SPDYE4A6NLX3 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC25.47■■□□□ 1.67
SPDYE4A6NLX3 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC25.47■■□□□ 1.67
SPDYE4A6NLX3 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC25.47■■□□□ 1.67
SPDYE4A6NLX3 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
SPDYE4A6NLX3 AP004609.3-201ENST00000610705 1884 ntBASIC25.47■■□□□ 1.67
SPDYE4A6NLX3 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
SPDYE4A6NLX3 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
SPDYE4A6NLX3 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
SPDYE4A6NLX3 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC25.46■■□□□ 1.67
SPDYE4A6NLX3 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC25.46■■□□□ 1.67
SPDYE4A6NLX3 USP48-205ENST00000421625 2818 ntTSL 2 BASIC25.46■■□□□ 1.67
SPDYE4A6NLX3 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
SPDYE4A6NLX3 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
SPDYE4A6NLX3 TSPY9P-201ENST00000440215 945 ntBASIC25.45■■□□□ 1.66
SPDYE4A6NLX3 TSPY11P-201ENST00000442607 1045 ntBASIC25.45■■□□□ 1.66
SPDYE4A6NLX3 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC25.45■■□□□ 1.66
SPDYE4A6NLX3 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC25.45■■□□□ 1.66
SPDYE4A6NLX3 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC25.45■■□□□ 1.66
SPDYE4A6NLX3 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC25.45■■□□□ 1.66
SPDYE4A6NLX3 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
SPDYE4A6NLX3 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC25.44■■□□□ 1.66
SPDYE4A6NLX3 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
SPDYE4A6NLX3 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC25.44■■□□□ 1.66
SPDYE4A6NLX3 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
SPDYE4A6NLX3 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
SPDYE4A6NLX3 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
SPDYE4A6NLX3 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
SPDYE4A6NLX3 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
SPDYE4A6NLX3 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC25.44■■□□□ 1.66
SPDYE4A6NLX3 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC25.44■■□□□ 1.66
SPDYE4A6NLX3 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
SPDYE4A6NLX3 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC25.44■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms