Protein–RNA interactions for Protein: A6NI15

MSGN1, Mesogenin-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSGN1A6NI15 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
MSGN1A6NI15 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC19.03■□□□□ 0.64
MSGN1A6NI15 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
MSGN1A6NI15 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
MSGN1A6NI15 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.03■□□□□ 0.64
MSGN1A6NI15 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
MSGN1A6NI15 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.64
MSGN1A6NI15 RNF126P1-201ENST00000567452 1320 ntBASIC19.02■□□□□ 0.64
MSGN1A6NI15 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
MSGN1A6NI15 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
MSGN1A6NI15 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
MSGN1A6NI15 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
MSGN1A6NI15 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
MSGN1A6NI15 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC19.02■□□□□ 0.64
MSGN1A6NI15 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
MSGN1A6NI15 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
MSGN1A6NI15 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
MSGN1A6NI15 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
MSGN1A6NI15 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
MSGN1A6NI15 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MSGN1A6NI15 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
MSGN1A6NI15 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
MSGN1A6NI15 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MSGN1A6NI15 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
MSGN1A6NI15 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
MSGN1A6NI15 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MSGN1A6NI15 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
MSGN1A6NI15 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19■□□□□ 0.63
MSGN1A6NI15 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
MSGN1A6NI15 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MSGN1A6NI15 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MSGN1A6NI15 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
MSGN1A6NI15 GFER-205ENST00000569451 517 ntTSL 5 BASIC19■□□□□ 0.63
MSGN1A6NI15 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC19■□□□□ 0.63
MSGN1A6NI15 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC19■□□□□ 0.63
MSGN1A6NI15 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
MSGN1A6NI15 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19■□□□□ 0.63
MSGN1A6NI15 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
MSGN1A6NI15 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC18.99■□□□□ 0.63
MSGN1A6NI15 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
MSGN1A6NI15 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
MSGN1A6NI15 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
MSGN1A6NI15 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
MSGN1A6NI15 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC18.99■□□□□ 0.63
MSGN1A6NI15 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
MSGN1A6NI15 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC18.99■□□□□ 0.63
MSGN1A6NI15 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
MSGN1A6NI15 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MSGN1A6NI15 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
MSGN1A6NI15 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC18.98■□□□□ 0.63
MSGN1A6NI15 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
MSGN1A6NI15 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
MSGN1A6NI15 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
MSGN1A6NI15 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC18.98■□□□□ 0.63
MSGN1A6NI15 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
MSGN1A6NI15 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
MSGN1A6NI15 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MSGN1A6NI15 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MSGN1A6NI15 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MSGN1A6NI15 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC18.97■□□□□ 0.63
MSGN1A6NI15 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC18.97■□□□□ 0.63
MSGN1A6NI15 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC18.97■□□□□ 0.63
MSGN1A6NI15 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC18.97■□□□□ 0.63
MSGN1A6NI15 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MSGN1A6NI15 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC18.97■□□□□ 0.63
MSGN1A6NI15 LSR-205ENST00000427250 1606 ntTSL 2 BASIC18.96■□□□□ 0.63
MSGN1A6NI15 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
MSGN1A6NI15 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC18.96■□□□□ 0.63
MSGN1A6NI15 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MSGN1A6NI15 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MSGN1A6NI15 AC026202.3-201ENST00000600805 1127 ntBASIC18.96■□□□□ 0.63
MSGN1A6NI15 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
MSGN1A6NI15 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
MSGN1A6NI15 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
MSGN1A6NI15 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MSGN1A6NI15 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
MSGN1A6NI15 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
MSGN1A6NI15 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
MSGN1A6NI15 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
MSGN1A6NI15 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
MSGN1A6NI15 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
MSGN1A6NI15 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
MSGN1A6NI15 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
MSGN1A6NI15 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
MSGN1A6NI15 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
MSGN1A6NI15 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
MSGN1A6NI15 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC18.95■□□□□ 0.62
MSGN1A6NI15 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC18.95■□□□□ 0.62
MSGN1A6NI15 TERT-206ENST00000508104 2486 ntTSL 5 BASIC18.95■□□□□ 0.62
MSGN1A6NI15 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
MSGN1A6NI15 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC18.94■□□□□ 0.62
MSGN1A6NI15 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MSGN1A6NI15 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MSGN1A6NI15 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC18.94■□□□□ 0.62
MSGN1A6NI15 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
MSGN1A6NI15 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
MSGN1A6NI15 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MSGN1A6NI15 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
MSGN1A6NI15 RAP2CP1-202ENST00000605179 643 ntBASIC18.94■□□□□ 0.62
MSGN1A6NI15 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms