Protein–RNA interactions for Protein: A0A0K0K1A3

TRBV10-1, T-cell receptor beta variable 10-1(gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV10-1A0A0K0K1A3 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
TRBV10-1A0A0K0K1A3 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
TRBV10-1A0A0K0K1A3 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC16.2■□□□□ 0.18
TRBV10-1A0A0K0K1A3 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRBV10-1A0A0K0K1A3 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC16.2■□□□□ 0.18
TRBV10-1A0A0K0K1A3 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRBV10-1A0A0K0K1A3 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRBV10-1A0A0K0K1A3 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRBV10-1A0A0K0K1A3 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
TRBV10-1A0A0K0K1A3 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRBV10-1A0A0K0K1A3 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC16.2■□□□□ 0.18
TRBV10-1A0A0K0K1A3 U85056.1-201ENST00000616429 682 ntBASIC16.2■□□□□ 0.18
TRBV10-1A0A0K0K1A3 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC16.2■□□□□ 0.18
TRBV10-1A0A0K0K1A3 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC16.2■□□□□ 0.18
TRBV10-1A0A0K0K1A3 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC16.2■□□□□ 0.18
TRBV10-1A0A0K0K1A3 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
TRBV10-1A0A0K0K1A3 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRBV10-1A0A0K0K1A3 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
TRBV10-1A0A0K0K1A3 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC16.19■□□□□ 0.18
TRBV10-1A0A0K0K1A3 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRBV10-1A0A0K0K1A3 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRBV10-1A0A0K0K1A3 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRBV10-1A0A0K0K1A3 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRBV10-1A0A0K0K1A3 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRBV10-1A0A0K0K1A3 STK32C-205ENST00000456004 607 ntTSL 2 BASIC16.19■□□□□ 0.18
TRBV10-1A0A0K0K1A3 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC16.19■□□□□ 0.18
TRBV10-1A0A0K0K1A3 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC16.19■□□□□ 0.18
TRBV10-1A0A0K0K1A3 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC16.19■□□□□ 0.18
TRBV10-1A0A0K0K1A3 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRBV10-1A0A0K0K1A3 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRBV10-1A0A0K0K1A3 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC16.19■□□□□ 0.18
TRBV10-1A0A0K0K1A3 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
TRBV10-1A0A0K0K1A3 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
TRBV10-1A0A0K0K1A3 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRBV10-1A0A0K0K1A3 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC16.18■□□□□ 0.18
TRBV10-1A0A0K0K1A3 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRBV10-1A0A0K0K1A3 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC16.18■□□□□ 0.18
TRBV10-1A0A0K0K1A3 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
TRBV10-1A0A0K0K1A3 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC16.18■□□□□ 0.18
TRBV10-1A0A0K0K1A3 MTX2-204ENST00000443241 799 ntTSL 3 BASIC16.18■□□□□ 0.18
TRBV10-1A0A0K0K1A3 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
TRBV10-1A0A0K0K1A3 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRBV10-1A0A0K0K1A3 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRBV10-1A0A0K0K1A3 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
TRBV10-1A0A0K0K1A3 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRBV10-1A0A0K0K1A3 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRBV10-1A0A0K0K1A3 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRBV10-1A0A0K0K1A3 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRBV10-1A0A0K0K1A3 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC16.17■□□□□ 0.18
TRBV10-1A0A0K0K1A3 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRBV10-1A0A0K0K1A3 CASK-201ENST00000378154 2494 ntTSL 5 BASIC16.17■□□□□ 0.18
TRBV10-1A0A0K0K1A3 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRBV10-1A0A0K0K1A3 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC16.17■□□□□ 0.18
TRBV10-1A0A0K0K1A3 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRBV10-1A0A0K0K1A3 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
TRBV10-1A0A0K0K1A3 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRBV10-1A0A0K0K1A3 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRBV10-1A0A0K0K1A3 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRBV10-1A0A0K0K1A3 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC16.17■□□□□ 0.18
TRBV10-1A0A0K0K1A3 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRBV10-1A0A0K0K1A3 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV10-1A0A0K0K1A3 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
TRBV10-1A0A0K0K1A3 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
TRBV10-1A0A0K0K1A3 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV10-1A0A0K0K1A3 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV10-1A0A0K0K1A3 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV10-1A0A0K0K1A3 KRT18P60-201ENST00000312876 1297 ntBASIC16.16■□□□□ 0.18
TRBV10-1A0A0K0K1A3 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV10-1A0A0K0K1A3 AC139795.1-202ENST00000500444 432 ntBASIC16.16■□□□□ 0.18
TRBV10-1A0A0K0K1A3 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV10-1A0A0K0K1A3 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC16.16■□□□□ 0.18
TRBV10-1A0A0K0K1A3 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV10-1A0A0K0K1A3 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV10-1A0A0K0K1A3 AC068473.5-201ENST00000616428 2072 ntBASIC16.15■□□□□ 0.18
TRBV10-1A0A0K0K1A3 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV10-1A0A0K0K1A3 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV10-1A0A0K0K1A3 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV10-1A0A0K0K1A3 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC16.15■□□□□ 0.18
TRBV10-1A0A0K0K1A3 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC16.15■□□□□ 0.18
TRBV10-1A0A0K0K1A3 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV10-1A0A0K0K1A3 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV10-1A0A0K0K1A3 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
TRBV10-1A0A0K0K1A3 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV10-1A0A0K0K1A3 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV10-1A0A0K0K1A3 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV10-1A0A0K0K1A3 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV10-1A0A0K0K1A3 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC16.15■□□□□ 0.18
TRBV10-1A0A0K0K1A3 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC16.15■□□□□ 0.18
TRBV10-1A0A0K0K1A3 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV10-1A0A0K0K1A3 NFE2L3P1-201ENST00000588207 1959 ntBASIC16.15■□□□□ 0.18
TRBV10-1A0A0K0K1A3 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV10-1A0A0K0K1A3 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC16.14■□□□□ 0.18
TRBV10-1A0A0K0K1A3 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
TRBV10-1A0A0K0K1A3 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
TRBV10-1A0A0K0K1A3 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRBV10-1A0A0K0K1A3 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
TRBV10-1A0A0K0K1A3 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRBV10-1A0A0K0K1A3 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRBV10-1A0A0K0K1A3 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRBV10-1A0A0K0K1A3 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms