Protein–RNA interactions for Protein: A0A0J9YWB2

TRBV7-9, T-cell receptor beta variable 7-9 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV7-9A0A0J9YWB2 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC17.1■□□□□ 0.33
TRBV7-9A0A0J9YWB2 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV7-9A0A0J9YWB2 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
TRBV7-9A0A0J9YWB2 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV7-9A0A0J9YWB2 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC17.1■□□□□ 0.33
TRBV7-9A0A0J9YWB2 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC17.1■□□□□ 0.33
TRBV7-9A0A0J9YWB2 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC17.1■□□□□ 0.33
TRBV7-9A0A0J9YWB2 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV7-9A0A0J9YWB2 MIR6765-201ENST00000614092 87 ntBASIC17.1■□□□□ 0.33
TRBV7-9A0A0J9YWB2 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV7-9A0A0J9YWB2 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV7-9A0A0J9YWB2 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV7-9A0A0J9YWB2 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV7-9A0A0J9YWB2 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC17.1■□□□□ 0.33
TRBV7-9A0A0J9YWB2 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV7-9A0A0J9YWB2 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV7-9A0A0J9YWB2 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV7-9A0A0J9YWB2 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC17.09■□□□□ 0.33
TRBV7-9A0A0J9YWB2 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV7-9A0A0J9YWB2 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV7-9A0A0J9YWB2 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV7-9A0A0J9YWB2 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC17.09■□□□□ 0.33
TRBV7-9A0A0J9YWB2 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
TRBV7-9A0A0J9YWB2 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV7-9A0A0J9YWB2 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV7-9A0A0J9YWB2 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
TRBV7-9A0A0J9YWB2 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV7-9A0A0J9YWB2 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRBV7-9A0A0J9YWB2 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRBV7-9A0A0J9YWB2 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRBV7-9A0A0J9YWB2 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRBV7-9A0A0J9YWB2 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC17.08■□□□□ 0.32
TRBV7-9A0A0J9YWB2 AL592293.1-201ENST00000502889 1188 ntBASIC17.08■□□□□ 0.32
TRBV7-9A0A0J9YWB2 ABHD17AP3-201ENST00000503096 1137 ntBASIC17.08■□□□□ 0.32
TRBV7-9A0A0J9YWB2 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRBV7-9A0A0J9YWB2 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC17.08■□□□□ 0.32
TRBV7-9A0A0J9YWB2 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV7-9A0A0J9YWB2 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV7-9A0A0J9YWB2 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV7-9A0A0J9YWB2 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC17.07■□□□□ 0.32
TRBV7-9A0A0J9YWB2 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC17.07■□□□□ 0.32
TRBV7-9A0A0J9YWB2 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC17.07■□□□□ 0.32
TRBV7-9A0A0J9YWB2 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV7-9A0A0J9YWB2 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV7-9A0A0J9YWB2 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV7-9A0A0J9YWB2 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV7-9A0A0J9YWB2 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC17.06■□□□□ 0.32
TRBV7-9A0A0J9YWB2 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRBV7-9A0A0J9YWB2 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRBV7-9A0A0J9YWB2 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRBV7-9A0A0J9YWB2 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC17.06■□□□□ 0.32
TRBV7-9A0A0J9YWB2 AC011551.1-201ENST00000614101 683 ntBASIC17.06■□□□□ 0.32
TRBV7-9A0A0J9YWB2 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRBV7-9A0A0J9YWB2 AC068473.5-201ENST00000616428 2072 ntBASIC17.06■□□□□ 0.32
TRBV7-9A0A0J9YWB2 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRBV7-9A0A0J9YWB2 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRBV7-9A0A0J9YWB2 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
TRBV7-9A0A0J9YWB2 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRBV7-9A0A0J9YWB2 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRBV7-9A0A0J9YWB2 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC17.06■□□□□ 0.32
TRBV7-9A0A0J9YWB2 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRBV7-9A0A0J9YWB2 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC17.05■□□□□ 0.32
TRBV7-9A0A0J9YWB2 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
TRBV7-9A0A0J9YWB2 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV7-9A0A0J9YWB2 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC17.05■□□□□ 0.32
TRBV7-9A0A0J9YWB2 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV7-9A0A0J9YWB2 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV7-9A0A0J9YWB2 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV7-9A0A0J9YWB2 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC17.05■□□□□ 0.32
TRBV7-9A0A0J9YWB2 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV7-9A0A0J9YWB2 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC17.05■□□□□ 0.32
TRBV7-9A0A0J9YWB2 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV7-9A0A0J9YWB2 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
TRBV7-9A0A0J9YWB2 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
TRBV7-9A0A0J9YWB2 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV7-9A0A0J9YWB2 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV7-9A0A0J9YWB2 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC17.04■□□□□ 0.32
TRBV7-9A0A0J9YWB2 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC17.04■□□□□ 0.32
TRBV7-9A0A0J9YWB2 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV7-9A0A0J9YWB2 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV7-9A0A0J9YWB2 HYI-213ENST00000583037 1322 ntTSL 5 BASIC17.04■□□□□ 0.32
TRBV7-9A0A0J9YWB2 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV7-9A0A0J9YWB2 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV7-9A0A0J9YWB2 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV7-9A0A0J9YWB2 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV7-9A0A0J9YWB2 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV7-9A0A0J9YWB2 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
TRBV7-9A0A0J9YWB2 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC17.04■□□□□ 0.32
TRBV7-9A0A0J9YWB2 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
TRBV7-9A0A0J9YWB2 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC17.03■□□□□ 0.32
TRBV7-9A0A0J9YWB2 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRBV7-9A0A0J9YWB2 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRBV7-9A0A0J9YWB2 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRBV7-9A0A0J9YWB2 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
TRBV7-9A0A0J9YWB2 LONRF2P2-201ENST00000439212 571 ntBASIC17.03■□□□□ 0.32
TRBV7-9A0A0J9YWB2 SPCS2P3-201ENST00000500401 656 ntBASIC17.03■□□□□ 0.32
TRBV7-9A0A0J9YWB2 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRBV7-9A0A0J9YWB2 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC17.03■□□□□ 0.32
TRBV7-9A0A0J9YWB2 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC17.03■□□□□ 0.32
TRBV7-9A0A0J9YWB2 AL022069.1-201ENST00000568025 1636 ntBASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 12.8 ms