Protein–RNA interactions for Protein: A0A0B4J240

TRAV10, T-cell receptor alpha variable 10 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV10A0A0B4J240 SRD5A1P1-201ENST00000442297 786 ntBASIC16.23■□□□□ 0.19
TRAV10A0A0B4J240 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV10A0A0B4J240 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV10A0A0B4J240 REST-206ENST00000612429 1376 ntTSL 5 BASIC16.23■□□□□ 0.19
TRAV10A0A0B4J240 REST-207ENST00000616975 1370 ntTSL 5 BASIC16.23■□□□□ 0.19
TRAV10A0A0B4J240 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV10A0A0B4J240 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC16.23■□□□□ 0.19
TRAV10A0A0B4J240 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV10A0A0B4J240 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV10A0A0B4J240 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC16.22■□□□□ 0.19
TRAV10A0A0B4J240 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV10A0A0B4J240 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV10A0A0B4J240 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV10A0A0B4J240 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV10A0A0B4J240 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV10A0A0B4J240 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC16.21■□□□□ 0.19
TRAV10A0A0B4J240 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV10A0A0B4J240 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC16.21■□□□□ 0.19
TRAV10A0A0B4J240 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
TRAV10A0A0B4J240 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV10A0A0B4J240 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC16.21■□□□□ 0.19
TRAV10A0A0B4J240 RASSF1-AS1-201ENST00000629828 790 ntBASIC16.21■□□□□ 0.19
TRAV10A0A0B4J240 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
TRAV10A0A0B4J240 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
TRAV10A0A0B4J240 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
TRAV10A0A0B4J240 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV10A0A0B4J240 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC16.2■□□□□ 0.18
TRAV10A0A0B4J240 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC16.2■□□□□ 0.18
TRAV10A0A0B4J240 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC16.2■□□□□ 0.18
TRAV10A0A0B4J240 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC16.2■□□□□ 0.18
TRAV10A0A0B4J240 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC16.2■□□□□ 0.18
TRAV10A0A0B4J240 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV10A0A0B4J240 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV10A0A0B4J240 SHF-207ENST00000560540 2062 ntTSL 5 BASIC16.2■□□□□ 0.18
TRAV10A0A0B4J240 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC16.19■□□□□ 0.18
TRAV10A0A0B4J240 AC131274.2-201ENST00000580697 1507 ntBASIC16.19■□□□□ 0.18
TRAV10A0A0B4J240 LSR-205ENST00000427250 1606 ntTSL 2 BASIC16.19■□□□□ 0.18
TRAV10A0A0B4J240 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
TRAV10A0A0B4J240 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV10A0A0B4J240 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV10A0A0B4J240 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV10A0A0B4J240 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV10A0A0B4J240 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC16.19■□□□□ 0.18
TRAV10A0A0B4J240 AC110285.6-201ENST00000617652 491 ntBASIC16.19■□□□□ 0.18
TRAV10A0A0B4J240 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV10A0A0B4J240 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV10A0A0B4J240 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV10A0A0B4J240 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV10A0A0B4J240 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
TRAV10A0A0B4J240 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC16.18■□□□□ 0.18
TRAV10A0A0B4J240 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC16.18■□□□□ 0.18
TRAV10A0A0B4J240 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV10A0A0B4J240 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC16.18■□□□□ 0.18
TRAV10A0A0B4J240 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV10A0A0B4J240 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV10A0A0B4J240 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV10A0A0B4J240 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV10A0A0B4J240 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC16.17■□□□□ 0.18
TRAV10A0A0B4J240 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC16.17■□□□□ 0.18
TRAV10A0A0B4J240 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV10A0A0B4J240 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV10A0A0B4J240 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC16.17■□□□□ 0.18
TRAV10A0A0B4J240 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV10A0A0B4J240 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
TRAV10A0A0B4J240 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
TRAV10A0A0B4J240 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
TRAV10A0A0B4J240 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV10A0A0B4J240 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV10A0A0B4J240 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV10A0A0B4J240 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC16.16■□□□□ 0.18
TRAV10A0A0B4J240 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
TRAV10A0A0B4J240 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV10A0A0B4J240 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
TRAV10A0A0B4J240 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV10A0A0B4J240 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC16.16■□□□□ 0.18
TRAV10A0A0B4J240 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC16.16■□□□□ 0.18
TRAV10A0A0B4J240 AC133561.4-201ENST00000566112 224 ntBASIC16.16■□□□□ 0.18
TRAV10A0A0B4J240 AC092171.4-201ENST00000609130 632 ntBASIC16.16■□□□□ 0.18
TRAV10A0A0B4J240 AL161729.1-201ENST00000604104 1402 ntBASIC16.16■□□□□ 0.18
TRAV10A0A0B4J240 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV10A0A0B4J240 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV10A0A0B4J240 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV10A0A0B4J240 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC16.15■□□□□ 0.18
TRAV10A0A0B4J240 GATM-206ENST00000558336 1522 ntTSL 2 BASIC16.15■□□□□ 0.18
TRAV10A0A0B4J240 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV10A0A0B4J240 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC16.15■□□□□ 0.18
TRAV10A0A0B4J240 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV10A0A0B4J240 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC16.15■□□□□ 0.18
TRAV10A0A0B4J240 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
TRAV10A0A0B4J240 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC16.15■□□□□ 0.18
TRAV10A0A0B4J240 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV10A0A0B4J240 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC16.15■□□□□ 0.18
TRAV10A0A0B4J240 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC16.15■□□□□ 0.18
TRAV10A0A0B4J240 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC16.15■□□□□ 0.18
TRAV10A0A0B4J240 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV10A0A0B4J240 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV10A0A0B4J240 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
TRAV10A0A0B4J240 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV10A0A0B4J240 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV10A0A0B4J240 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms