Protein–RNA interactions for Protein: A0A0A6YYK4

TRBV7-1, T-cell receptor beta variable 7-1 (non-functional) (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV7-1A0A0A6YYK4 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRBV7-1A0A0A6YYK4 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRBV7-1A0A0A6YYK4 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRBV7-1A0A0A6YYK4 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRBV7-1A0A0A6YYK4 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRBV7-1A0A0A6YYK4 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC17.84■□□□□ 0.45
TRBV7-1A0A0A6YYK4 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRBV7-1A0A0A6YYK4 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRBV7-1A0A0A6YYK4 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC17.84■□□□□ 0.45
TRBV7-1A0A0A6YYK4 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC17.84■□□□□ 0.45
TRBV7-1A0A0A6YYK4 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRBV7-1A0A0A6YYK4 AF131216.4-201ENST00000638924 1588 ntBASIC17.83■□□□□ 0.45
TRBV7-1A0A0A6YYK4 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRBV7-1A0A0A6YYK4 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC17.83■□□□□ 0.44
TRBV7-1A0A0A6YYK4 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC17.83■□□□□ 0.44
TRBV7-1A0A0A6YYK4 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRBV7-1A0A0A6YYK4 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRBV7-1A0A0A6YYK4 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC17.83■□□□□ 0.44
TRBV7-1A0A0A6YYK4 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRBV7-1A0A0A6YYK4 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRBV7-1A0A0A6YYK4 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRBV7-1A0A0A6YYK4 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRBV7-1A0A0A6YYK4 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
TRBV7-1A0A0A6YYK4 THRA-202ENST00000394121 2260 ntTSL 2 BASIC17.82■□□□□ 0.44
TRBV7-1A0A0A6YYK4 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRBV7-1A0A0A6YYK4 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC17.82■□□□□ 0.44
TRBV7-1A0A0A6YYK4 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRBV7-1A0A0A6YYK4 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
TRBV7-1A0A0A6YYK4 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRBV7-1A0A0A6YYK4 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRBV7-1A0A0A6YYK4 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRBV7-1A0A0A6YYK4 AC131274.2-201ENST00000580697 1507 ntBASIC17.82■□□□□ 0.44
TRBV7-1A0A0A6YYK4 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRBV7-1A0A0A6YYK4 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
TRBV7-1A0A0A6YYK4 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRBV7-1A0A0A6YYK4 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC17.81■□□□□ 0.44
TRBV7-1A0A0A6YYK4 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRBV7-1A0A0A6YYK4 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRBV7-1A0A0A6YYK4 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRBV7-1A0A0A6YYK4 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRBV7-1A0A0A6YYK4 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC17.81■□□□□ 0.44
TRBV7-1A0A0A6YYK4 LSM7-203ENST00000585409 512 ntTSL 2 BASIC17.81■□□□□ 0.44
TRBV7-1A0A0A6YYK4 AC137630.3-201ENST00000607245 391 ntBASIC17.81■□□□□ 0.44
TRBV7-1A0A0A6YYK4 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC17.81■□□□□ 0.44
TRBV7-1A0A0A6YYK4 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRBV7-1A0A0A6YYK4 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
TRBV7-1A0A0A6YYK4 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRBV7-1A0A0A6YYK4 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC17.8■□□□□ 0.44
TRBV7-1A0A0A6YYK4 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRBV7-1A0A0A6YYK4 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRBV7-1A0A0A6YYK4 PKM-204ENST00000449901 2526 ntTSL 2 BASIC17.8■□□□□ 0.44
TRBV7-1A0A0A6YYK4 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRBV7-1A0A0A6YYK4 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRBV7-1A0A0A6YYK4 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
TRBV7-1A0A0A6YYK4 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRBV7-1A0A0A6YYK4 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
TRBV7-1A0A0A6YYK4 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRBV7-1A0A0A6YYK4 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC17.79■□□□□ 0.44
TRBV7-1A0A0A6YYK4 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC17.79■□□□□ 0.44
TRBV7-1A0A0A6YYK4 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRBV7-1A0A0A6YYK4 ABCB10P4-201ENST00000566803 2184 ntBASIC17.79■□□□□ 0.44
TRBV7-1A0A0A6YYK4 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRBV7-1A0A0A6YYK4 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRBV7-1A0A0A6YYK4 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRBV7-1A0A0A6YYK4 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRBV7-1A0A0A6YYK4 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
TRBV7-1A0A0A6YYK4 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRBV7-1A0A0A6YYK4 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRBV7-1A0A0A6YYK4 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRBV7-1A0A0A6YYK4 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRBV7-1A0A0A6YYK4 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC17.78■□□□□ 0.44
TRBV7-1A0A0A6YYK4 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC17.78■□□□□ 0.44
TRBV7-1A0A0A6YYK4 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
TRBV7-1A0A0A6YYK4 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRBV7-1A0A0A6YYK4 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRBV7-1A0A0A6YYK4 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TRBV7-1A0A0A6YYK4 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRBV7-1A0A0A6YYK4 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TRBV7-1A0A0A6YYK4 BX664725.1-201ENST00000438252 379 ntBASIC17.77■□□□□ 0.44
TRBV7-1A0A0A6YYK4 AC004448.1-201ENST00000458332 883 ntBASIC17.77■□□□□ 0.44
TRBV7-1A0A0A6YYK4 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
TRBV7-1A0A0A6YYK4 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRBV7-1A0A0A6YYK4 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC17.77■□□□□ 0.44
TRBV7-1A0A0A6YYK4 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TRBV7-1A0A0A6YYK4 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRBV7-1A0A0A6YYK4 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRBV7-1A0A0A6YYK4 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRBV7-1A0A0A6YYK4 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.43
TRBV7-1A0A0A6YYK4 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRBV7-1A0A0A6YYK4 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TRBV7-1A0A0A6YYK4 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
TRBV7-1A0A0A6YYK4 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRBV7-1A0A0A6YYK4 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRBV7-1A0A0A6YYK4 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRBV7-1A0A0A6YYK4 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRBV7-1A0A0A6YYK4 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC17.76■□□□□ 0.43
TRBV7-1A0A0A6YYK4 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRBV7-1A0A0A6YYK4 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRBV7-1A0A0A6YYK4 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRBV7-1A0A0A6YYK4 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms