Protein–RNA interactions for Protein: A0A0A6YYG3

TRBV6-8, T-cell receptor beta variable 6-8 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-8A0A0A6YYG3 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRBV6-8A0A0A6YYG3 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC15.96■□□□□ 0.15
TRBV6-8A0A0A6YYG3 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRBV6-8A0A0A6YYG3 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
TRBV6-8A0A0A6YYG3 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRBV6-8A0A0A6YYG3 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRBV6-8A0A0A6YYG3 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC15.96■□□□□ 0.15
TRBV6-8A0A0A6YYG3 CASK-201ENST00000378154 2494 ntTSL 5 BASIC15.96■□□□□ 0.15
TRBV6-8A0A0A6YYG3 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC15.96■□□□□ 0.15
TRBV6-8A0A0A6YYG3 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRBV6-8A0A0A6YYG3 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRBV6-8A0A0A6YYG3 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRBV6-8A0A0A6YYG3 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRBV6-8A0A0A6YYG3 DUSP8P5-201ENST00000422884 1815 ntBASIC15.96■□□□□ 0.14
TRBV6-8A0A0A6YYG3 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRBV6-8A0A0A6YYG3 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRBV6-8A0A0A6YYG3 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRBV6-8A0A0A6YYG3 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
TRBV6-8A0A0A6YYG3 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC15.95■□□□□ 0.14
TRBV6-8A0A0A6YYG3 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRBV6-8A0A0A6YYG3 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRBV6-8A0A0A6YYG3 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRBV6-8A0A0A6YYG3 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRBV6-8A0A0A6YYG3 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC15.95■□□□□ 0.14
TRBV6-8A0A0A6YYG3 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRBV6-8A0A0A6YYG3 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRBV6-8A0A0A6YYG3 AL022069.1-201ENST00000568025 1636 ntBASIC15.94■□□□□ 0.14
TRBV6-8A0A0A6YYG3 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TRBV6-8A0A0A6YYG3 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRBV6-8A0A0A6YYG3 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC15.94■□□□□ 0.14
TRBV6-8A0A0A6YYG3 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC15.94■□□□□ 0.14
TRBV6-8A0A0A6YYG3 BHLHE23-202ENST00000612929 1109 ntBASIC15.94■□□□□ 0.14
TRBV6-8A0A0A6YYG3 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC15.94■□□□□ 0.14
TRBV6-8A0A0A6YYG3 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRBV6-8A0A0A6YYG3 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC15.94■□□□□ 0.14
TRBV6-8A0A0A6YYG3 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC15.94■□□□□ 0.14
TRBV6-8A0A0A6YYG3 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRBV6-8A0A0A6YYG3 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC15.94■□□□□ 0.14
TRBV6-8A0A0A6YYG3 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC15.94■□□□□ 0.14
TRBV6-8A0A0A6YYG3 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC15.94■□□□□ 0.14
TRBV6-8A0A0A6YYG3 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC15.94■□□□□ 0.14
TRBV6-8A0A0A6YYG3 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRBV6-8A0A0A6YYG3 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
TRBV6-8A0A0A6YYG3 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC15.94■□□□□ 0.14
TRBV6-8A0A0A6YYG3 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
TRBV6-8A0A0A6YYG3 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
TRBV6-8A0A0A6YYG3 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRBV6-8A0A0A6YYG3 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TRBV6-8A0A0A6YYG3 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TRBV6-8A0A0A6YYG3 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC15.93■□□□□ 0.14
TRBV6-8A0A0A6YYG3 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC15.93■□□□□ 0.14
TRBV6-8A0A0A6YYG3 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TRBV6-8A0A0A6YYG3 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC15.93■□□□□ 0.14
TRBV6-8A0A0A6YYG3 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
TRBV6-8A0A0A6YYG3 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRBV6-8A0A0A6YYG3 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRBV6-8A0A0A6YYG3 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC15.92■□□□□ 0.14
TRBV6-8A0A0A6YYG3 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRBV6-8A0A0A6YYG3 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC15.92■□□□□ 0.14
TRBV6-8A0A0A6YYG3 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRBV6-8A0A0A6YYG3 AC074183.2-201ENST00000623112 922 ntBASIC15.92■□□□□ 0.14
TRBV6-8A0A0A6YYG3 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC15.92■□□□□ 0.14
TRBV6-8A0A0A6YYG3 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC15.92■□□□□ 0.14
TRBV6-8A0A0A6YYG3 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRBV6-8A0A0A6YYG3 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRBV6-8A0A0A6YYG3 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRBV6-8A0A0A6YYG3 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRBV6-8A0A0A6YYG3 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRBV6-8A0A0A6YYG3 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC15.91■□□□□ 0.14
TRBV6-8A0A0A6YYG3 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRBV6-8A0A0A6YYG3 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRBV6-8A0A0A6YYG3 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRBV6-8A0A0A6YYG3 ATP5G2P3-201ENST00000429083 425 ntBASIC15.91■□□□□ 0.14
TRBV6-8A0A0A6YYG3 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC15.91■□□□□ 0.14
TRBV6-8A0A0A6YYG3 GAK-223ENST00000628912 497 ntTSL 5 BASIC15.91■□□□□ 0.14
TRBV6-8A0A0A6YYG3 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
TRBV6-8A0A0A6YYG3 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRBV6-8A0A0A6YYG3 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRBV6-8A0A0A6YYG3 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TRBV6-8A0A0A6YYG3 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRBV6-8A0A0A6YYG3 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRBV6-8A0A0A6YYG3 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRBV6-8A0A0A6YYG3 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRBV6-8A0A0A6YYG3 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRBV6-8A0A0A6YYG3 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRBV6-8A0A0A6YYG3 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRBV6-8A0A0A6YYG3 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRBV6-8A0A0A6YYG3 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRBV6-8A0A0A6YYG3 STK32C-205ENST00000456004 607 ntTSL 2 BASIC15.9■□□□□ 0.14
TRBV6-8A0A0A6YYG3 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRBV6-8A0A0A6YYG3 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
TRBV6-8A0A0A6YYG3 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC15.9■□□□□ 0.14
TRBV6-8A0A0A6YYG3 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
TRBV6-8A0A0A6YYG3 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRBV6-8A0A0A6YYG3 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC15.9■□□□□ 0.14
TRBV6-8A0A0A6YYG3 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV6-8A0A0A6YYG3 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV6-8A0A0A6YYG3 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC15.89■□□□□ 0.13
TRBV6-8A0A0A6YYG3 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV6-8A0A0A6YYG3 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms