Protein–RNA interactions for Protein: A0A075B6T7

TRAV6, T-cell receptor alpha variable 6 (Fragment), humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV6A0A075B6T7 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRAV6A0A075B6T7 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRAV6A0A075B6T7 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRAV6A0A075B6T7 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRAV6A0A075B6T7 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRAV6A0A075B6T7 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRAV6A0A075B6T7 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRAV6A0A075B6T7 FOXO3B-201ENST00000395675 1928 ntBASIC19.67■□□□□ 0.74
TRAV6A0A075B6T7 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRAV6A0A075B6T7 AL359504.2-201ENST00000605506 1601 ntBASIC19.67■□□□□ 0.74
TRAV6A0A075B6T7 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC19.67■□□□□ 0.74
TRAV6A0A075B6T7 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC19.67■□□□□ 0.74
TRAV6A0A075B6T7 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
TRAV6A0A075B6T7 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRAV6A0A075B6T7 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
TRAV6A0A075B6T7 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
TRAV6A0A075B6T7 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRAV6A0A075B6T7 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
TRAV6A0A075B6T7 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC19.67■□□□□ 0.74
TRAV6A0A075B6T7 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRAV6A0A075B6T7 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRAV6A0A075B6T7 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRAV6A0A075B6T7 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC19.66■□□□□ 0.74
TRAV6A0A075B6T7 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
TRAV6A0A075B6T7 HLA-L-211ENST00000482052 1765 ntBASIC19.66■□□□□ 0.74
TRAV6A0A075B6T7 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC19.66■□□□□ 0.74
TRAV6A0A075B6T7 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRAV6A0A075B6T7 MIR6089-201ENST00000616698 64 ntBASIC19.66■□□□□ 0.74
TRAV6A0A075B6T7 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRAV6A0A075B6T7 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
TRAV6A0A075B6T7 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
TRAV6A0A075B6T7 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRAV6A0A075B6T7 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRAV6A0A075B6T7 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRAV6A0A075B6T7 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRAV6A0A075B6T7 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
TRAV6A0A075B6T7 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
TRAV6A0A075B6T7 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRAV6A0A075B6T7 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRAV6A0A075B6T7 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRAV6A0A075B6T7 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRAV6A0A075B6T7 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRAV6A0A075B6T7 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRAV6A0A075B6T7 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
TRAV6A0A075B6T7 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRAV6A0A075B6T7 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
TRAV6A0A075B6T7 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRAV6A0A075B6T7 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRAV6A0A075B6T7 ECEL1P1-201ENST00000373592 1742 ntBASIC19.65■□□□□ 0.74
TRAV6A0A075B6T7 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.65■□□□□ 0.74
TRAV6A0A075B6T7 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
TRAV6A0A075B6T7 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC19.64■□□□□ 0.73
TRAV6A0A075B6T7 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TRAV6A0A075B6T7 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TRAV6A0A075B6T7 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TRAV6A0A075B6T7 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRAV6A0A075B6T7 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TRAV6A0A075B6T7 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRAV6A0A075B6T7 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.63■□□□□ 0.73
TRAV6A0A075B6T7 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC19.63■□□□□ 0.73
TRAV6A0A075B6T7 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
TRAV6A0A075B6T7 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRAV6A0A075B6T7 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRAV6A0A075B6T7 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRAV6A0A075B6T7 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
TRAV6A0A075B6T7 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAV6A0A075B6T7 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
TRAV6A0A075B6T7 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.62■□□□□ 0.73
TRAV6A0A075B6T7 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAV6A0A075B6T7 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
TRAV6A0A075B6T7 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAV6A0A075B6T7 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAV6A0A075B6T7 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC19.61■□□□□ 0.73
TRAV6A0A075B6T7 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.61■□□□□ 0.73
TRAV6A0A075B6T7 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRAV6A0A075B6T7 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRAV6A0A075B6T7 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRAV6A0A075B6T7 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRAV6A0A075B6T7 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRAV6A0A075B6T7 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
TRAV6A0A075B6T7 ANOS2P-203ENST00000472227 1816 ntBASIC19.6■□□□□ 0.73
TRAV6A0A075B6T7 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRAV6A0A075B6T7 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRAV6A0A075B6T7 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
TRAV6A0A075B6T7 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRAV6A0A075B6T7 AC097358.2-201ENST00000607541 1159 ntBASIC19.6■□□□□ 0.73
TRAV6A0A075B6T7 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRAV6A0A075B6T7 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
TRAV6A0A075B6T7 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.59■□□□□ 0.73
TRAV6A0A075B6T7 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRAV6A0A075B6T7 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRAV6A0A075B6T7 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.59■□□□□ 0.73
TRAV6A0A075B6T7 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRAV6A0A075B6T7 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
TRAV6A0A075B6T7 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRAV6A0A075B6T7 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRAV6A0A075B6T7 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRAV6A0A075B6T7 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRAV6A0A075B6T7 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TRAV6A0A075B6T7 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms