Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CTDP1Q9Y5B0 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CTDP1Q9Y5B0 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CTDP1Q9Y5B0 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CTDP1Q9Y5B0 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CTDP1Q9Y5B0 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CTDP1Q9Y5B0 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CTDP1Q9Y5B0 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC17.45■□□□□ 0.38
CTDP1Q9Y5B0 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CTDP1Q9Y5B0 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CTDP1Q9Y5B0 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CTDP1Q9Y5B0 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CTDP1Q9Y5B0 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC17.45■□□□□ 0.38
CTDP1Q9Y5B0 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CTDP1Q9Y5B0 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CTDP1Q9Y5B0 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
CTDP1Q9Y5B0 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CTDP1Q9Y5B0 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC17.45■□□□□ 0.38
CTDP1Q9Y5B0 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CTDP1Q9Y5B0 MIR663B-201ENST00000408361 115 ntBASIC17.45■□□□□ 0.38
CTDP1Q9Y5B0 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
CTDP1Q9Y5B0 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC17.45■□□□□ 0.38
CTDP1Q9Y5B0 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CTDP1Q9Y5B0 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CTDP1Q9Y5B0 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC17.45■□□□□ 0.38
CTDP1Q9Y5B0 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC17.45■□□□□ 0.38
CTDP1Q9Y5B0 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CTDP1Q9Y5B0 AC106820.3-201ENST00000561653 397 ntBASIC17.45■□□□□ 0.38
CTDP1Q9Y5B0 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC17.45■□□□□ 0.38
CTDP1Q9Y5B0 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC17.45■□□□□ 0.38
CTDP1Q9Y5B0 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC17.45■□□□□ 0.38
CTDP1Q9Y5B0 AC007663.3-201ENST00000609632 465 ntBASIC17.45■□□□□ 0.38
CTDP1Q9Y5B0 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CTDP1Q9Y5B0 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CTDP1Q9Y5B0 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC17.45■□□□□ 0.38
CTDP1Q9Y5B0 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC17.45■□□□□ 0.38
CTDP1Q9Y5B0 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
CTDP1Q9Y5B0 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC17.45■□□□□ 0.38
CTDP1Q9Y5B0 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC17.45■□□□□ 0.38
CTDP1Q9Y5B0 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CTDP1Q9Y5B0 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC17.45■□□□□ 0.38
CTDP1Q9Y5B0 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CTDP1Q9Y5B0 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CTDP1Q9Y5B0 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC17.45■□□□□ 0.38
CTDP1Q9Y5B0 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CTDP1Q9Y5B0 CLUHP2-201ENST00000426660 1303 ntBASIC17.45■□□□□ 0.38
CTDP1Q9Y5B0 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CTDP1Q9Y5B0 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CTDP1Q9Y5B0 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CTDP1Q9Y5B0 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CTDP1Q9Y5B0 AC092053.3-201ENST00000641308 4975 ntBASIC17.45■□□□□ 0.38
CTDP1Q9Y5B0 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CTDP1Q9Y5B0 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CTDP1Q9Y5B0 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC17.44■□□□□ 0.38
CTDP1Q9Y5B0 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CTDP1Q9Y5B0 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CTDP1Q9Y5B0 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.44■□□□□ 0.38
CTDP1Q9Y5B0 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC17.44■□□□□ 0.38
CTDP1Q9Y5B0 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CTDP1Q9Y5B0 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CTDP1Q9Y5B0 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CTDP1Q9Y5B0 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC17.44■□□□□ 0.38
CTDP1Q9Y5B0 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC17.44■□□□□ 0.38
CTDP1Q9Y5B0 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC17.44■□□□□ 0.38
CTDP1Q9Y5B0 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC17.44■□□□□ 0.38
CTDP1Q9Y5B0 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CTDP1Q9Y5B0 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC17.44■□□□□ 0.38
CTDP1Q9Y5B0 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CTDP1Q9Y5B0 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CTDP1Q9Y5B0 HNRNPA1P63-201ENST00000427917 963 ntBASIC17.44■□□□□ 0.38
CTDP1Q9Y5B0 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC17.44■□□□□ 0.38
CTDP1Q9Y5B0 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC17.44■□□□□ 0.38
CTDP1Q9Y5B0 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CTDP1Q9Y5B0 HSPB1P2-201ENST00000448722 546 ntBASIC17.44■□□□□ 0.38
CTDP1Q9Y5B0 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CTDP1Q9Y5B0 AC026434.2-201ENST00000506094 1078 ntBASIC17.44■□□□□ 0.38
CTDP1Q9Y5B0 ZNF767P-206ENST00000513792 565 ntBASIC17.44■□□□□ 0.38
CTDP1Q9Y5B0 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC17.44■□□□□ 0.38
CTDP1Q9Y5B0 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CTDP1Q9Y5B0 RNF41-210ENST00000552244 716 ntTSL 3 BASIC17.44■□□□□ 0.38
CTDP1Q9Y5B0 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC17.44■□□□□ 0.38
CTDP1Q9Y5B0 DUX4L47-201ENST00000566374 394 ntBASIC17.44■□□□□ 0.38
CTDP1Q9Y5B0 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
CTDP1Q9Y5B0 AL139099.5-201ENST00000635274 300 ntBASIC17.44■□□□□ 0.38
CTDP1Q9Y5B0 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC17.44■□□□□ 0.38
CTDP1Q9Y5B0 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CTDP1Q9Y5B0 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CTDP1Q9Y5B0 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CTDP1Q9Y5B0 AC067750.1-201ENST00000608826 6545 ntBASIC17.44■□□□□ 0.38
CTDP1Q9Y5B0 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CTDP1Q9Y5B0 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC17.44■□□□□ 0.38
CTDP1Q9Y5B0 STK33-217ENST00000534493 1895 ntTSL 2 BASIC17.44■□□□□ 0.38
CTDP1Q9Y5B0 AL513477.1-201ENST00000602865 2407 ntBASIC17.43■□□□□ 0.38
CTDP1Q9Y5B0 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CTDP1Q9Y5B0 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CTDP1Q9Y5B0 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CTDP1Q9Y5B0 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC17.43■□□□□ 0.38
CTDP1Q9Y5B0 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC17.43■□□□□ 0.38
CTDP1Q9Y5B0 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CTDP1Q9Y5B0 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms