Protein–RNA interactions for Protein: Q9UPV9

TRAK1, Trafficking kinesin-binding protein 1, humanhuman

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1Q9UPV9 FXNP2-201ENST00000411625 547 ntBASIC20.9■□□□□ 0.94
TRAK1Q9UPV9 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TRAK1Q9UPV9 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC20.9■□□□□ 0.94
TRAK1Q9UPV9 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC20.9■□□□□ 0.94
TRAK1Q9UPV9 EEF1DP6-201ENST00000449232 372 ntBASIC20.9■□□□□ 0.94
TRAK1Q9UPV9 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TRAK1Q9UPV9 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC20.9■□□□□ 0.94
TRAK1Q9UPV9 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
TRAK1Q9UPV9 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC20.9■□□□□ 0.94
TRAK1Q9UPV9 AC020922.3-201ENST00000595064 547 ntBASIC20.9■□□□□ 0.94
TRAK1Q9UPV9 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC20.9■□□□□ 0.94
TRAK1Q9UPV9 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
TRAK1Q9UPV9 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TRAK1Q9UPV9 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
TRAK1Q9UPV9 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRAK1Q9UPV9 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TRAK1Q9UPV9 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRAK1Q9UPV9 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC20.9■□□□□ 0.94
TRAK1Q9UPV9 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
TRAK1Q9UPV9 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
TRAK1Q9UPV9 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
TRAK1Q9UPV9 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
TRAK1Q9UPV9 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
TRAK1Q9UPV9 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
TRAK1Q9UPV9 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
TRAK1Q9UPV9 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC20.89■□□□□ 0.93
TRAK1Q9UPV9 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRAK1Q9UPV9 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TRAK1Q9UPV9 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRAK1Q9UPV9 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
TRAK1Q9UPV9 PARVG-202ENST00000415224 999 ntTSL 2 BASIC20.89■□□□□ 0.93
TRAK1Q9UPV9 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TRAK1Q9UPV9 SKA2-202ENST00000437036 625 ntTSL 2 BASIC20.89■□□□□ 0.93
TRAK1Q9UPV9 PRKXP1-201ENST00000561423 1122 ntBASIC20.89■□□□□ 0.93
TRAK1Q9UPV9 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC20.89■□□□□ 0.93
TRAK1Q9UPV9 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
TRAK1Q9UPV9 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC20.89■□□□□ 0.93
TRAK1Q9UPV9 BX088702.1-201ENST00000610784 235 ntBASIC20.89■□□□□ 0.93
TRAK1Q9UPV9 AP000346.4-201ENST00000614827 381 ntBASIC20.89■□□□□ 0.93
TRAK1Q9UPV9 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
TRAK1Q9UPV9 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRAK1Q9UPV9 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRAK1Q9UPV9 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRAK1Q9UPV9 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRAK1Q9UPV9 AC007292.2-201ENST00000593524 1812 ntBASIC20.89■□□□□ 0.93
TRAK1Q9UPV9 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
TRAK1Q9UPV9 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC20.89■□□□□ 0.93
TRAK1Q9UPV9 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC20.89■□□□□ 0.93
TRAK1Q9UPV9 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC20.89■□□□□ 0.93
TRAK1Q9UPV9 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TRAK1Q9UPV9 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRAK1Q9UPV9 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRAK1Q9UPV9 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRAK1Q9UPV9 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC20.88■□□□□ 0.93
TRAK1Q9UPV9 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TRAK1Q9UPV9 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRAK1Q9UPV9 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRAK1Q9UPV9 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRAK1Q9UPV9 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC20.88■□□□□ 0.93
TRAK1Q9UPV9 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TRAK1Q9UPV9 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TRAK1Q9UPV9 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC20.88■□□□□ 0.93
TRAK1Q9UPV9 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
TRAK1Q9UPV9 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC20.88■□□□□ 0.93
TRAK1Q9UPV9 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
TRAK1Q9UPV9 MIR33B-201ENST00000385104 96 ntBASIC20.88■□□□□ 0.93
TRAK1Q9UPV9 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC20.88■□□□□ 0.93
TRAK1Q9UPV9 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TRAK1Q9UPV9 ALG3P1-201ENST00000508806 1114 ntBASIC20.88■□□□□ 0.93
TRAK1Q9UPV9 GCOM2-201ENST00000509133 1104 ntBASIC20.88■□□□□ 0.93
TRAK1Q9UPV9 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC20.88■□□□□ 0.93
TRAK1Q9UPV9 AC116345.2-201ENST00000512837 523 ntBASIC20.88■□□□□ 0.93
TRAK1Q9UPV9 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRAK1Q9UPV9 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC20.88■□□□□ 0.93
TRAK1Q9UPV9 PAM16-211ENST00000575848 518 ntTSL 3 BASIC20.88■□□□□ 0.93
TRAK1Q9UPV9 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
TRAK1Q9UPV9 MIR4722-201ENST00000578292 60 ntBASIC20.88■□□□□ 0.93
TRAK1Q9UPV9 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC20.88■□□□□ 0.93
TRAK1Q9UPV9 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC20.88■□□□□ 0.93
TRAK1Q9UPV9 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC20.88■□□□□ 0.93
TRAK1Q9UPV9 AC027601.3-201ENST00000622907 509 ntBASIC20.88■□□□□ 0.93
TRAK1Q9UPV9 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRAK1Q9UPV9 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRAK1Q9UPV9 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRAK1Q9UPV9 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRAK1Q9UPV9 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRAK1Q9UPV9 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRAK1Q9UPV9 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TRAK1Q9UPV9 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
TRAK1Q9UPV9 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRAK1Q9UPV9 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TRAK1Q9UPV9 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRAK1Q9UPV9 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TRAK1Q9UPV9 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRAK1Q9UPV9 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRAK1Q9UPV9 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC20.87■□□□□ 0.93
TRAK1Q9UPV9 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRAK1Q9UPV9 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRAK1Q9UPV9 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TRAK1Q9UPV9 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms