Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
NPC1L1Q9UHC9 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC20.03■□□□□ 0.8
NPC1L1Q9UHC9 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC20.03■□□□□ 0.8
NPC1L1Q9UHC9 AC108725.1-201ENST00000495472 409 ntBASIC20.03■□□□□ 0.8
NPC1L1Q9UHC9 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC20.03■□□□□ 0.8
NPC1L1Q9UHC9 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
NPC1L1Q9UHC9 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC20.03■□□□□ 0.8
NPC1L1Q9UHC9 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC20.03■□□□□ 0.8
NPC1L1Q9UHC9 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC20.03■□□□□ 0.8
NPC1L1Q9UHC9 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC20.03■□□□□ 0.8
NPC1L1Q9UHC9 MIR6720-201ENST00000611664 98 ntBASIC20.03■□□□□ 0.8
NPC1L1Q9UHC9 AL008638.5-201ENST00000623814 1298 ntBASIC20.03■□□□□ 0.8
NPC1L1Q9UHC9 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
NPC1L1Q9UHC9 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
NPC1L1Q9UHC9 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
NPC1L1Q9UHC9 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
NPC1L1Q9UHC9 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
NPC1L1Q9UHC9 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NPC1L1Q9UHC9 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
NPC1L1Q9UHC9 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NPC1L1Q9UHC9 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
NPC1L1Q9UHC9 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
NPC1L1Q9UHC9 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC20.02■□□□□ 0.8
NPC1L1Q9UHC9 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
NPC1L1Q9UHC9 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NPC1L1Q9UHC9 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NPC1L1Q9UHC9 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
NPC1L1Q9UHC9 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
NPC1L1Q9UHC9 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
NPC1L1Q9UHC9 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC20.02■□□□□ 0.8
NPC1L1Q9UHC9 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NPC1L1Q9UHC9 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
NPC1L1Q9UHC9 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC20.02■□□□□ 0.8
NPC1L1Q9UHC9 USB1-203ENST00000539737 1212 ntTSL 2 BASIC20.02■□□□□ 0.8
NPC1L1Q9UHC9 AC027237.1-201ENST00000560942 655 ntBASIC20.02■□□□□ 0.8
NPC1L1Q9UHC9 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NPC1L1Q9UHC9 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NPC1L1Q9UHC9 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC20.02■□□□□ 0.8
NPC1L1Q9UHC9 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC20.02■□□□□ 0.8
NPC1L1Q9UHC9 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
NPC1L1Q9UHC9 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NPC1L1Q9UHC9 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC20.02■□□□□ 0.8
NPC1L1Q9UHC9 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NPC1L1Q9UHC9 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
NPC1L1Q9UHC9 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC20.02■□□□□ 0.79
NPC1L1Q9UHC9 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
NPC1L1Q9UHC9 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
NPC1L1Q9UHC9 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC20.02■□□□□ 0.79
NPC1L1Q9UHC9 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
NPC1L1Q9UHC9 AC232323.1-201ENST00000540724 2099 ntBASIC20.02■□□□□ 0.79
NPC1L1Q9UHC9 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
NPC1L1Q9UHC9 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
NPC1L1Q9UHC9 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NPC1L1Q9UHC9 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC20.01■□□□□ 0.79
NPC1L1Q9UHC9 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NPC1L1Q9UHC9 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NPC1L1Q9UHC9 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
NPC1L1Q9UHC9 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
NPC1L1Q9UHC9 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
NPC1L1Q9UHC9 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NPC1L1Q9UHC9 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NPC1L1Q9UHC9 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC20.01■□□□□ 0.79
NPC1L1Q9UHC9 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC20.01■□□□□ 0.79
NPC1L1Q9UHC9 BNIP3P13-201ENST00000599968 566 ntBASIC20.01■□□□□ 0.79
NPC1L1Q9UHC9 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC20.01■□□□□ 0.79
NPC1L1Q9UHC9 AL023803.2-201ENST00000620080 638 ntBASIC20.01■□□□□ 0.79
NPC1L1Q9UHC9 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NPC1L1Q9UHC9 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
NPC1L1Q9UHC9 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC20.01■□□□□ 0.79
NPC1L1Q9UHC9 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC20.01■□□□□ 0.79
NPC1L1Q9UHC9 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
NPC1L1Q9UHC9 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC20.01■□□□□ 0.79
NPC1L1Q9UHC9 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NPC1L1Q9UHC9 AC006504.5-208ENST00000588784 2401 ntBASIC20.01■□□□□ 0.79
NPC1L1Q9UHC9 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NPC1L1Q9UHC9 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NPC1L1Q9UHC9 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
NPC1L1Q9UHC9 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NPC1L1Q9UHC9 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NPC1L1Q9UHC9 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NPC1L1Q9UHC9 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC20.01■□□□□ 0.79
NPC1L1Q9UHC9 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NPC1L1Q9UHC9 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NPC1L1Q9UHC9 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
NPC1L1Q9UHC9 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
NPC1L1Q9UHC9 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NPC1L1Q9UHC9 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NPC1L1Q9UHC9 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NPC1L1Q9UHC9 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC20■□□□□ 0.79
NPC1L1Q9UHC9 TMBIM7P-202ENST00000641474 1516 ntBASIC20■□□□□ 0.79
NPC1L1Q9UHC9 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC20■□□□□ 0.79
NPC1L1Q9UHC9 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NPC1L1Q9UHC9 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NPC1L1Q9UHC9 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NPC1L1Q9UHC9 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NPC1L1Q9UHC9 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
NPC1L1Q9UHC9 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NPC1L1Q9UHC9 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
NPC1L1Q9UHC9 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC20■□□□□ 0.79
NPC1L1Q9UHC9 VDAC1P1-201ENST00000439229 848 ntBASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms