Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
DNMT3BQ9UBC3 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
DNMT3BQ9UBC3 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
DNMT3BQ9UBC3 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
DNMT3BQ9UBC3 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
DNMT3BQ9UBC3 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
DNMT3BQ9UBC3 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC15.66■□□□□ 0.1
DNMT3BQ9UBC3 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
DNMT3BQ9UBC3 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
DNMT3BQ9UBC3 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
DNMT3BQ9UBC3 PUDPP3-201ENST00000445368 636 ntBASIC15.66■□□□□ 0.1
DNMT3BQ9UBC3 RPL18P13-201ENST00000478088 569 ntBASIC15.66■□□□□ 0.1
DNMT3BQ9UBC3 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC15.66■□□□□ 0.1
DNMT3BQ9UBC3 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC15.66■□□□□ 0.1
DNMT3BQ9UBC3 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC15.66■□□□□ 0.1
DNMT3BQ9UBC3 MIR4706-201ENST00000582134 82 ntBASIC15.66■□□□□ 0.1
DNMT3BQ9UBC3 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
DNMT3BQ9UBC3 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
DNMT3BQ9UBC3 AL133499.1-201ENST00000596207 608 ntBASIC15.66■□□□□ 0.1
DNMT3BQ9UBC3 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC15.66■□□□□ 0.1
DNMT3BQ9UBC3 AF254983.2-201ENST00000612331 135 ntBASIC15.66■□□□□ 0.1
DNMT3BQ9UBC3 AC079336.7-201ENST00000623428 1078 ntBASIC15.66■□□□□ 0.1
DNMT3BQ9UBC3 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.66■□□□□ 0.1
DNMT3BQ9UBC3 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
DNMT3BQ9UBC3 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
DNMT3BQ9UBC3 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
DNMT3BQ9UBC3 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
DNMT3BQ9UBC3 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
DNMT3BQ9UBC3 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
DNMT3BQ9UBC3 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
DNMT3BQ9UBC3 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
DNMT3BQ9UBC3 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
DNMT3BQ9UBC3 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
DNMT3BQ9UBC3 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC15.66■□□□□ 0.1
DNMT3BQ9UBC3 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
DNMT3BQ9UBC3 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.66■□□□□ 0.1
DNMT3BQ9UBC3 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
DNMT3BQ9UBC3 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
DNMT3BQ9UBC3 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
DNMT3BQ9UBC3 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.65■□□□□ 0.1
DNMT3BQ9UBC3 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
DNMT3BQ9UBC3 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
DNMT3BQ9UBC3 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
DNMT3BQ9UBC3 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
DNMT3BQ9UBC3 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.65■□□□□ 0.1
DNMT3BQ9UBC3 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
DNMT3BQ9UBC3 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
DNMT3BQ9UBC3 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
DNMT3BQ9UBC3 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
DNMT3BQ9UBC3 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
DNMT3BQ9UBC3 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
DNMT3BQ9UBC3 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
DNMT3BQ9UBC3 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.65■□□□□ 0.1
DNMT3BQ9UBC3 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC15.65■□□□□ 0.1
DNMT3BQ9UBC3 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
DNMT3BQ9UBC3 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
DNMT3BQ9UBC3 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC15.65■□□□□ 0.1
DNMT3BQ9UBC3 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC15.65■□□□□ 0.1
DNMT3BQ9UBC3 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC15.65■□□□□ 0.1
DNMT3BQ9UBC3 AC125604.1-201ENST00000496255 707 ntBASIC15.65■□□□□ 0.1
DNMT3BQ9UBC3 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC15.65■□□□□ 0.1
DNMT3BQ9UBC3 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC15.65■□□□□ 0.1
DNMT3BQ9UBC3 AL161670.2-201ENST00000557650 1227 ntBASIC15.65■□□□□ 0.1
DNMT3BQ9UBC3 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC15.65■□□□□ 0.1
DNMT3BQ9UBC3 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
DNMT3BQ9UBC3 SNORD3B-2-202ENST00000571722 791 ntBASIC15.65■□□□□ 0.1
DNMT3BQ9UBC3 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
DNMT3BQ9UBC3 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
DNMT3BQ9UBC3 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC15.65■□□□□ 0.1
DNMT3BQ9UBC3 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
DNMT3BQ9UBC3 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
DNMT3BQ9UBC3 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
DNMT3BQ9UBC3 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
DNMT3BQ9UBC3 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC15.65■□□□□ 0.1
DNMT3BQ9UBC3 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
DNMT3BQ9UBC3 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.65■□□□□ 0.1
DNMT3BQ9UBC3 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
DNMT3BQ9UBC3 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
DNMT3BQ9UBC3 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
DNMT3BQ9UBC3 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.65■□□□□ 0.1
DNMT3BQ9UBC3 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
DNMT3BQ9UBC3 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
DNMT3BQ9UBC3 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC15.65■□□□□ 0.1
DNMT3BQ9UBC3 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC15.65■□□□□ 0.1
DNMT3BQ9UBC3 AC099063.4-201ENST00000641099 1602 ntBASIC15.65■□□□□ 0.1
DNMT3BQ9UBC3 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
DNMT3BQ9UBC3 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.1
DNMT3BQ9UBC3 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC15.64■□□□□ 0.09
DNMT3BQ9UBC3 AL157791.1-201ENST00000553667 1699 ntBASIC15.64■□□□□ 0.09
DNMT3BQ9UBC3 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
DNMT3BQ9UBC3 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
DNMT3BQ9UBC3 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
DNMT3BQ9UBC3 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
DNMT3BQ9UBC3 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
DNMT3BQ9UBC3 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
DNMT3BQ9UBC3 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
DNMT3BQ9UBC3 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC15.64■□□□□ 0.09
DNMT3BQ9UBC3 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
DNMT3BQ9UBC3 FXNP2-201ENST00000411625 547 ntBASIC15.64■□□□□ 0.09
DNMT3BQ9UBC3 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms