Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SLC52A1Q9NWF4 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
SLC52A1Q9NWF4 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SLC52A1Q9NWF4 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SLC52A1Q9NWF4 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC21.18■□□□□ 0.98
SLC52A1Q9NWF4 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
SLC52A1Q9NWF4 HLA-DMA-203ENST00000395305 777 ntBASIC21.18■□□□□ 0.98
SLC52A1Q9NWF4 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC21.18■□□□□ 0.98
SLC52A1Q9NWF4 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SLC52A1Q9NWF4 AC092638.2-201ENST00000441105 947 ntBASIC21.18■□□□□ 0.98
SLC52A1Q9NWF4 RN7SL530P-201ENST00000485097 298 ntBASIC21.18■□□□□ 0.98
SLC52A1Q9NWF4 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SLC52A1Q9NWF4 AC107464.3-201ENST00000609172 737 ntBASIC21.18■□□□□ 0.98
SLC52A1Q9NWF4 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC21.18■□□□□ 0.98
SLC52A1Q9NWF4 AC073911.3-201ENST00000624401 631 ntBASIC21.18■□□□□ 0.98
SLC52A1Q9NWF4 AC090502.4-201ENST00000551714 1386 ntBASIC21.18■□□□□ 0.98
SLC52A1Q9NWF4 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SLC52A1Q9NWF4 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SLC52A1Q9NWF4 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SLC52A1Q9NWF4 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SLC52A1Q9NWF4 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SLC52A1Q9NWF4 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
SLC52A1Q9NWF4 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SLC52A1Q9NWF4 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
SLC52A1Q9NWF4 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SLC52A1Q9NWF4 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SLC52A1Q9NWF4 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SLC52A1Q9NWF4 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SLC52A1Q9NWF4 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
SLC52A1Q9NWF4 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC21.17■□□□□ 0.98
SLC52A1Q9NWF4 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
SLC52A1Q9NWF4 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SLC52A1Q9NWF4 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC21.17■□□□□ 0.98
SLC52A1Q9NWF4 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SLC52A1Q9NWF4 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SLC52A1Q9NWF4 AP003398.1-201ENST00000531124 318 ntBASIC21.17■□□□□ 0.98
SLC52A1Q9NWF4 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC21.17■□□□□ 0.98
SLC52A1Q9NWF4 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
SLC52A1Q9NWF4 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SLC52A1Q9NWF4 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SLC52A1Q9NWF4 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC21.17■□□□□ 0.98
SLC52A1Q9NWF4 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SLC52A1Q9NWF4 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC21.17■□□□□ 0.98
SLC52A1Q9NWF4 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SLC52A1Q9NWF4 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC21.17■□□□□ 0.98
SLC52A1Q9NWF4 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC21.17■□□□□ 0.98
SLC52A1Q9NWF4 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SLC52A1Q9NWF4 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SLC52A1Q9NWF4 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SLC52A1Q9NWF4 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
SLC52A1Q9NWF4 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SLC52A1Q9NWF4 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SLC52A1Q9NWF4 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SLC52A1Q9NWF4 AL391005.1-201ENST00000623953 2435 ntBASIC21.16■□□□□ 0.98
SLC52A1Q9NWF4 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SLC52A1Q9NWF4 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC21.16■□□□□ 0.98
SLC52A1Q9NWF4 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC21.16■□□□□ 0.98
SLC52A1Q9NWF4 AC023024.2-201ENST00000623561 1993 ntBASIC21.16■□□□□ 0.98
SLC52A1Q9NWF4 HLA-DQB1-202ENST00000399079 1501 ntBASIC21.16■□□□□ 0.98
SLC52A1Q9NWF4 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC21.16■□□□□ 0.98
SLC52A1Q9NWF4 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC21.16■□□□□ 0.98
SLC52A1Q9NWF4 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
SLC52A1Q9NWF4 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC21.16■□□□□ 0.98
SLC52A1Q9NWF4 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC21.16■□□□□ 0.98
SLC52A1Q9NWF4 AL354861.1-201ENST00000445213 355 ntBASIC21.16■□□□□ 0.98
SLC52A1Q9NWF4 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SLC52A1Q9NWF4 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC21.16■□□□□ 0.98
SLC52A1Q9NWF4 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC21.16■□□□□ 0.98
SLC52A1Q9NWF4 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC21.16■□□□□ 0.98
SLC52A1Q9NWF4 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SLC52A1Q9NWF4 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC21.16■□□□□ 0.98
SLC52A1Q9NWF4 AC141586.1-203ENST00000567242 366 ntBASIC21.16■□□□□ 0.98
SLC52A1Q9NWF4 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC21.16■□□□□ 0.98
SLC52A1Q9NWF4 AC005357.2-202ENST00000590507 1060 ntBASIC21.16■□□□□ 0.98
SLC52A1Q9NWF4 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
SLC52A1Q9NWF4 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
SLC52A1Q9NWF4 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
SLC52A1Q9NWF4 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SLC52A1Q9NWF4 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SLC52A1Q9NWF4 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SLC52A1Q9NWF4 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC21.16■□□□□ 0.98
SLC52A1Q9NWF4 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SLC52A1Q9NWF4 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
SLC52A1Q9NWF4 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SLC52A1Q9NWF4 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC21.15■□□□□ 0.98
SLC52A1Q9NWF4 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SLC52A1Q9NWF4 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SLC52A1Q9NWF4 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SLC52A1Q9NWF4 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC21.15■□□□□ 0.98
SLC52A1Q9NWF4 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC21.15■□□□□ 0.98
SLC52A1Q9NWF4 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SLC52A1Q9NWF4 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SLC52A1Q9NWF4 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SLC52A1Q9NWF4 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SLC52A1Q9NWF4 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SLC52A1Q9NWF4 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SLC52A1Q9NWF4 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC21.15■□□□□ 0.98
SLC52A1Q9NWF4 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC21.15■□□□□ 0.98
SLC52A1Q9NWF4 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC21.15■□□□□ 0.98
SLC52A1Q9NWF4 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms