Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC16.1■□□□□ 0.17
CISHQ9NSE2 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CISHQ9NSE2 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CISHQ9NSE2 AC244669.2-201ENST00000612320 853 ntBASIC16.1■□□□□ 0.17
CISHQ9NSE2 AL354718.3-201ENST00000616414 581 ntBASIC16.1■□□□□ 0.17
CISHQ9NSE2 ETV2-208ENST00000621247 941 ntTSL 5 BASIC16.1■□□□□ 0.17
CISHQ9NSE2 AC132938.4-201ENST00000623835 848 ntBASIC16.1■□□□□ 0.17
CISHQ9NSE2 CR382287.1-201ENST00000623954 586 ntBASIC16.1■□□□□ 0.17
CISHQ9NSE2 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CISHQ9NSE2 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CISHQ9NSE2 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CISHQ9NSE2 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CISHQ9NSE2 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC16.1■□□□□ 0.17
CISHQ9NSE2 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CISHQ9NSE2 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CISHQ9NSE2 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC16.1■□□□□ 0.17
CISHQ9NSE2 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC16.1■□□□□ 0.17
CISHQ9NSE2 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
CISHQ9NSE2 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CISHQ9NSE2 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
CISHQ9NSE2 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CISHQ9NSE2 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CISHQ9NSE2 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CISHQ9NSE2 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CISHQ9NSE2 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC16.09■□□□□ 0.17
CISHQ9NSE2 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CISHQ9NSE2 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
CISHQ9NSE2 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CISHQ9NSE2 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC16.09■□□□□ 0.17
CISHQ9NSE2 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CISHQ9NSE2 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CISHQ9NSE2 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
CISHQ9NSE2 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CISHQ9NSE2 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC16.09■□□□□ 0.17
CISHQ9NSE2 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC16.09■□□□□ 0.17
CISHQ9NSE2 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CISHQ9NSE2 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CISHQ9NSE2 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CISHQ9NSE2 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC16.09■□□□□ 0.17
CISHQ9NSE2 AC016694.1-201ENST00000434179 700 ntBASIC16.09■□□□□ 0.17
CISHQ9NSE2 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC16.09■□□□□ 0.17
CISHQ9NSE2 U91328.1-201ENST00000437528 223 ntBASIC16.09■□□□□ 0.17
CISHQ9NSE2 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC16.09■□□□□ 0.17
CISHQ9NSE2 CROCCP4-201ENST00000457096 498 ntBASIC16.09■□□□□ 0.17
CISHQ9NSE2 AC007551.1-201ENST00000457394 519 ntBASIC16.09■□□□□ 0.17
CISHQ9NSE2 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CISHQ9NSE2 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC16.09■□□□□ 0.17
CISHQ9NSE2 APRT-204ENST00000563655 709 ntTSL 5 BASIC16.09■□□□□ 0.17
CISHQ9NSE2 AC106886.1-201ENST00000568660 600 ntBASIC16.09■□□□□ 0.17
CISHQ9NSE2 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CISHQ9NSE2 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
CISHQ9NSE2 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC16.09■□□□□ 0.17
CISHQ9NSE2 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CISHQ9NSE2 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC16.09■□□□□ 0.17
CISHQ9NSE2 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC16.09■□□□□ 0.17
CISHQ9NSE2 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CISHQ9NSE2 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CISHQ9NSE2 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC16.09■□□□□ 0.17
CISHQ9NSE2 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CISHQ9NSE2 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC16.09■□□□□ 0.17
CISHQ9NSE2 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC16.09■□□□□ 0.17
CISHQ9NSE2 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
CISHQ9NSE2 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CISHQ9NSE2 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CISHQ9NSE2 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CISHQ9NSE2 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.17
CISHQ9NSE2 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.17
CISHQ9NSE2 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CISHQ9NSE2 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CISHQ9NSE2 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC16.08■□□□□ 0.17
CISHQ9NSE2 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CISHQ9NSE2 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.17
CISHQ9NSE2 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CISHQ9NSE2 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CISHQ9NSE2 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CISHQ9NSE2 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC16.08■□□□□ 0.16
CISHQ9NSE2 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CISHQ9NSE2 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CISHQ9NSE2 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CISHQ9NSE2 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
CISHQ9NSE2 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CISHQ9NSE2 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CISHQ9NSE2 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CISHQ9NSE2 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CISHQ9NSE2 HIST1H2BPS3-201ENST00000419683 341 ntBASIC16.08■□□□□ 0.16
CISHQ9NSE2 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC16.08■□□□□ 0.16
CISHQ9NSE2 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC16.08■□□□□ 0.16
CISHQ9NSE2 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC16.08■□□□□ 0.16
CISHQ9NSE2 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CISHQ9NSE2 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC16.08■□□□□ 0.16
CISHQ9NSE2 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
CISHQ9NSE2 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC16.08■□□□□ 0.16
CISHQ9NSE2 ORC6-206ENST00000568364 888 ntTSL 5 BASIC16.08■□□□□ 0.16
CISHQ9NSE2 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC16.08■□□□□ 0.16
CISHQ9NSE2 AL162274.1-201ENST00000617191 1098 ntBASIC16.08■□□□□ 0.16
CISHQ9NSE2 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC16.08■□□□□ 0.16
CISHQ9NSE2 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
CISHQ9NSE2 CLUHP2-201ENST00000426660 1303 ntBASIC16.08■□□□□ 0.16
CISHQ9NSE2 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CISHQ9NSE2 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms