Protein–RNA interactions for Protein: Q9NRP4

SDHAF3, Succinate dehydrogenase assembly factor 3, mitochondrial, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3Q9NRP4 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SDHAF3Q9NRP4 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC13.94□□□□□ -0.18
SDHAF3Q9NRP4 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SDHAF3Q9NRP4 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SDHAF3Q9NRP4 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
SDHAF3Q9NRP4 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC13.94□□□□□ -0.18
SDHAF3Q9NRP4 KRT8P35-201ENST00000483942 1338 ntBASIC13.94□□□□□ -0.18
SDHAF3Q9NRP4 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SDHAF3Q9NRP4 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC13.94□□□□□ -0.18
SDHAF3Q9NRP4 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
SDHAF3Q9NRP4 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.94□□□□□ -0.18
SDHAF3Q9NRP4 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SDHAF3Q9NRP4 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SDHAF3Q9NRP4 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SDHAF3Q9NRP4 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
SDHAF3Q9NRP4 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
SDHAF3Q9NRP4 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC13.94□□□□□ -0.18
SDHAF3Q9NRP4 ACTBP8-201ENST00000403258 1108 ntBASIC13.94□□□□□ -0.18
SDHAF3Q9NRP4 AC005034.1-201ENST00000426657 489 ntBASIC13.94□□□□□ -0.18
SDHAF3Q9NRP4 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC13.94□□□□□ -0.18
SDHAF3Q9NRP4 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC13.94□□□□□ -0.18
SDHAF3Q9NRP4 KRT43P-201ENST00000434019 910 ntBASIC13.94□□□□□ -0.18
SDHAF3Q9NRP4 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SDHAF3Q9NRP4 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SDHAF3Q9NRP4 FUZ-207ENST00000526575 482 ntTSL 4 BASIC13.94□□□□□ -0.18
SDHAF3Q9NRP4 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SDHAF3Q9NRP4 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC13.94□□□□□ -0.18
SDHAF3Q9NRP4 AC132938.2-201ENST00000579188 680 ntBASIC13.94□□□□□ -0.18
SDHAF3Q9NRP4 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC13.94□□□□□ -0.18
SDHAF3Q9NRP4 AL022328.1-201ENST00000610050 478 ntBASIC13.94□□□□□ -0.18
SDHAF3Q9NRP4 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SDHAF3Q9NRP4 AL591163.1-201ENST00000641757 987 ntBASIC13.94□□□□□ -0.18
SDHAF3Q9NRP4 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC13.94□□□□□ -0.18
SDHAF3Q9NRP4 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SDHAF3Q9NRP4 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SDHAF3Q9NRP4 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SDHAF3Q9NRP4 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
SDHAF3Q9NRP4 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SDHAF3Q9NRP4 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC13.94□□□□□ -0.18
SDHAF3Q9NRP4 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SDHAF3Q9NRP4 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SDHAF3Q9NRP4 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SDHAF3Q9NRP4 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
SDHAF3Q9NRP4 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SDHAF3Q9NRP4 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SDHAF3Q9NRP4 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
SDHAF3Q9NRP4 USE1-206ENST00000595101 1776 ntTSL 2 BASIC13.94□□□□□ -0.18
SDHAF3Q9NRP4 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
SDHAF3Q9NRP4 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC13.93□□□□□ -0.18
SDHAF3Q9NRP4 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC13.93□□□□□ -0.18
SDHAF3Q9NRP4 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SDHAF3Q9NRP4 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
SDHAF3Q9NRP4 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SDHAF3Q9NRP4 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC13.93□□□□□ -0.18
SDHAF3Q9NRP4 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SDHAF3Q9NRP4 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
SDHAF3Q9NRP4 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SDHAF3Q9NRP4 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SDHAF3Q9NRP4 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SDHAF3Q9NRP4 PARN-202ENST00000420015 2360 ntTSL 2 BASIC13.93□□□□□ -0.18
SDHAF3Q9NRP4 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
SDHAF3Q9NRP4 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.93□□□□□ -0.18
SDHAF3Q9NRP4 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SDHAF3Q9NRP4 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SDHAF3Q9NRP4 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
SDHAF3Q9NRP4 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SDHAF3Q9NRP4 RNU1-114P-201ENST00000365297 166 ntBASIC13.93□□□□□ -0.18
SDHAF3Q9NRP4 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC13.93□□□□□ -0.18
SDHAF3Q9NRP4 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
SDHAF3Q9NRP4 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
SDHAF3Q9NRP4 AC005229.1-201ENST00000392885 409 ntBASIC13.93□□□□□ -0.18
SDHAF3Q9NRP4 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
SDHAF3Q9NRP4 PNKD-204ENST00000436005 978 ntTSL 5 BASIC13.93□□□□□ -0.18
SDHAF3Q9NRP4 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC13.93□□□□□ -0.18
SDHAF3Q9NRP4 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SDHAF3Q9NRP4 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC13.93□□□□□ -0.18
SDHAF3Q9NRP4 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC13.93□□□□□ -0.18
SDHAF3Q9NRP4 SLC25A47P1-201ENST00000531577 414 ntBASIC13.93□□□□□ -0.18
SDHAF3Q9NRP4 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
SDHAF3Q9NRP4 RBM7-207ENST00000544582 692 ntTSL 3 BASIC13.93□□□□□ -0.18
SDHAF3Q9NRP4 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC13.93□□□□□ -0.18
SDHAF3Q9NRP4 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
SDHAF3Q9NRP4 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC13.93□□□□□ -0.18
SDHAF3Q9NRP4 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
SDHAF3Q9NRP4 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
SDHAF3Q9NRP4 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SDHAF3Q9NRP4 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SDHAF3Q9NRP4 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC13.93□□□□□ -0.18
SDHAF3Q9NRP4 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SDHAF3Q9NRP4 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC13.93□□□□□ -0.18
SDHAF3Q9NRP4 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SDHAF3Q9NRP4 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SDHAF3Q9NRP4 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SDHAF3Q9NRP4 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC13.93□□□□□ -0.18
SDHAF3Q9NRP4 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SDHAF3Q9NRP4 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SDHAF3Q9NRP4 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SDHAF3Q9NRP4 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SDHAF3Q9NRP4 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC13.93□□□□□ -0.18
SDHAF3Q9NRP4 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms