Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 AC113133.1-201ENST00000522388 1088 ntTSL 2 BASIC13.67□□□□□ -0.22
CHD8Q9HCK8 AC006547.1-209ENST00000596334 996 ntTSL 5 BASIC13.67□□□□□ -0.22
CHD8Q9HCK8 AC005746.3-201ENST00000614751 393 ntBASIC13.67□□□□□ -0.22
CHD8Q9HCK8 MIR7848-201ENST00000617402 101 ntBASIC13.67□□□□□ -0.22
CHD8Q9HCK8 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC13.67□□□□□ -0.22
CHD8Q9HCK8 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC13.67□□□□□ -0.22
CHD8Q9HCK8 UBE2L5P-202ENST00000635918 1513 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
CHD8Q9HCK8 CFAP20-201ENST00000262498 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CHD8Q9HCK8 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CHD8Q9HCK8 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CHD8Q9HCK8 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CHD8Q9HCK8 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CHD8Q9HCK8 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CHD8Q9HCK8 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC13.66□□□□□ -0.22
CHD8Q9HCK8 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CHD8Q9HCK8 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
CHD8Q9HCK8 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CHD8Q9HCK8 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CHD8Q9HCK8 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC13.66□□□□□ -0.22
CHD8Q9HCK8 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CHD8Q9HCK8 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC13.66□□□□□ -0.22
CHD8Q9HCK8 C6orf203-201ENST00000311381 900 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CHD8Q9HCK8 HIST1H2BK-201ENST00000356950 381 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
CHD8Q9HCK8 AC004889.1-201ENST00000498693 856 ntTSL 5 BASIC13.66□□□□□ -0.22
CHD8Q9HCK8 LINC01490-202ENST00000551399 1260 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CHD8Q9HCK8 TPST2P1-201ENST00000564073 1102 ntBASIC13.66□□□□□ -0.22
CHD8Q9HCK8 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC13.66□□□□□ -0.22
CHD8Q9HCK8 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CHD8Q9HCK8 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC13.66□□□□□ -0.22
CHD8Q9HCK8 AL360270.3-201ENST00000609118 1348 ntBASIC13.66□□□□□ -0.22
CHD8Q9HCK8 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CHD8Q9HCK8 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CHD8Q9HCK8 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CHD8Q9HCK8 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC13.66□□□□□ -0.22
CHD8Q9HCK8 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CHD8Q9HCK8 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC13.66□□□□□ -0.22
CHD8Q9HCK8 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CHD8Q9HCK8 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC13.66□□□□□ -0.22
CHD8Q9HCK8 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CHD8Q9HCK8 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CHD8Q9HCK8 THAP4-203ENST00000402545 833 ntTSL 5 BASIC13.66□□□□□ -0.22
CHD8Q9HCK8 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CHD8Q9HCK8 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CHD8Q9HCK8 TMEM222-203ENST00000464813 1071 ntTSL 2 BASIC13.66□□□□□ -0.22
CHD8Q9HCK8 AC092910.2-201ENST00000491262 348 ntBASIC13.66□□□□□ -0.22
CHD8Q9HCK8 AC104964.1-201ENST00000520494 489 ntTSL 2 BASIC13.66□□□□□ -0.22
CHD8Q9HCK8 CACNA1C-IT3-201ENST00000542680 622 ntTSL 3 BASIC13.66□□□□□ -0.22
CHD8Q9HCK8 GABARAPL1-213ENST00000544284 531 ntTSL 3 BASIC13.66□□□□□ -0.22
CHD8Q9HCK8 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CHD8Q9HCK8 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
CHD8Q9HCK8 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CHD8Q9HCK8 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CHD8Q9HCK8 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CHD8Q9HCK8 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CHD8Q9HCK8 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CHD8Q9HCK8 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CHD8Q9HCK8 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CHD8Q9HCK8 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CHD8Q9HCK8 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
CHD8Q9HCK8 EML3-212ENST00000494176 2901 ntTSL 2 BASIC13.65□□□□□ -0.22
CHD8Q9HCK8 EML3-216ENST00000529309 2909 ntTSL 2 BASIC13.65□□□□□ -0.22
CHD8Q9HCK8 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CHD8Q9HCK8 XAGE2-201ENST00000286049 618 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CHD8Q9HCK8 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CHD8Q9HCK8 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC13.65□□□□□ -0.22
CHD8Q9HCK8 DLGAP4-AS1-203ENST00000439595 1207 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CHD8Q9HCK8 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CHD8Q9HCK8 B9D1-206ENST00000461069 923 ntTSL 2 BASIC13.65□□□□□ -0.22
CHD8Q9HCK8 RN7SL69P-201ENST00000468423 272 ntBASIC13.65□□□□□ -0.22
CHD8Q9HCK8 RRNAD1-204ENST00000476229 1096 ntTSL 5 BASIC13.65□□□□□ -0.22
CHD8Q9HCK8 AC106789.1-201ENST00000512927 570 ntTSL 4 BASIC13.65□□□□□ -0.22
CHD8Q9HCK8 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CHD8Q9HCK8 BLOC1S1-203ENST00000548925 571 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CHD8Q9HCK8 BMF-206ENST00000558774 671 ntTSL 3 BASIC13.65□□□□□ -0.22
CHD8Q9HCK8 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC13.65□□□□□ -0.22
CHD8Q9HCK8 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CHD8Q9HCK8 NAT9-204ENST00000578822 839 ntTSL 3 BASIC13.65□□□□□ -0.22
CHD8Q9HCK8 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC13.65□□□□□ -0.22
CHD8Q9HCK8 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CHD8Q9HCK8 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CHD8Q9HCK8 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC13.65□□□□□ -0.22
CHD8Q9HCK8 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC13.65□□□□□ -0.22
CHD8Q9HCK8 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CHD8Q9HCK8 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC13.65□□□□□ -0.22
CHD8Q9HCK8 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CHD8Q9HCK8 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
CHD8Q9HCK8 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CHD8Q9HCK8 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CHD8Q9HCK8 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
CHD8Q9HCK8 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CHD8Q9HCK8 AC006449.6-201ENST00000612330 2296 ntBASIC13.65□□□□□ -0.22
CHD8Q9HCK8 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.65□□□□□ -0.22
CHD8Q9HCK8 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CHD8Q9HCK8 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
CHD8Q9HCK8 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CHD8Q9HCK8 RN7SKP230-201ENST00000365642 335 ntBASIC13.65□□□□□ -0.22
CHD8Q9HCK8 SLC35F2-201ENST00000375682 1076 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
CHD8Q9HCK8 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
CHD8Q9HCK8 SERF2-209ENST00000409646 559 ntTSL 4 BASIC13.65□□□□□ -0.22
CHD8Q9HCK8 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms