Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 AP002472.1-201ENST00000577490 586 ntBASIC10.21□□□□□ -0.77
SND1-IT1Q9HBX3 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC10.21□□□□□ -0.77
SND1-IT1Q9HBX3 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC10.21□□□□□ -0.77
SND1-IT1Q9HBX3 AC027307.2-201ENST00000591252 911 ntBASIC10.21□□□□□ -0.77
SND1-IT1Q9HBX3 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
SND1-IT1Q9HBX3 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC10.21□□□□□ -0.77
SND1-IT1Q9HBX3 NKG7-205ENST00000600427 520 ntTSL 3 BASIC10.21□□□□□ -0.77
SND1-IT1Q9HBX3 AC097359.3-201ENST00000603982 1210 ntBASIC10.21□□□□□ -0.77
SND1-IT1Q9HBX3 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC10.21□□□□□ -0.77
SND1-IT1Q9HBX3 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC10.21□□□□□ -0.77
SND1-IT1Q9HBX3 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
SND1-IT1Q9HBX3 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
SND1-IT1Q9HBX3 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
SND1-IT1Q9HBX3 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC10.21□□□□□ -0.78
SND1-IT1Q9HBX3 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
SND1-IT1Q9HBX3 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC10.21□□□□□ -0.78
SND1-IT1Q9HBX3 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC10.21□□□□□ -0.78
SND1-IT1Q9HBX3 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
SND1-IT1Q9HBX3 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.78
SND1-IT1Q9HBX3 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
SND1-IT1Q9HBX3 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
SND1-IT1Q9HBX3 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC10.21□□□□□ -0.78
SND1-IT1Q9HBX3 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC10.21□□□□□ -0.78
SND1-IT1Q9HBX3 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
SND1-IT1Q9HBX3 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
SND1-IT1Q9HBX3 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.78
SND1-IT1Q9HBX3 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
SND1-IT1Q9HBX3 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
SND1-IT1Q9HBX3 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
SND1-IT1Q9HBX3 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC10.21□□□□□ -0.78
SND1-IT1Q9HBX3 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC10.21□□□□□ -0.78
SND1-IT1Q9HBX3 C8orf49-201ENST00000525043 1968 ntBASIC10.21□□□□□ -0.78
SND1-IT1Q9HBX3 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC10.21□□□□□ -0.78
SND1-IT1Q9HBX3 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.78
SND1-IT1Q9HBX3 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC10.21□□□□□ -0.78
SND1-IT1Q9HBX3 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
SND1-IT1Q9HBX3 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
SND1-IT1Q9HBX3 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
SND1-IT1Q9HBX3 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC10.21□□□□□ -0.78
SND1-IT1Q9HBX3 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC10.21□□□□□ -0.78
SND1-IT1Q9HBX3 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
SND1-IT1Q9HBX3 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC10.21□□□□□ -0.78
SND1-IT1Q9HBX3 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
SND1-IT1Q9HBX3 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC10.2□□□□□ -0.78
SND1-IT1Q9HBX3 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
SND1-IT1Q9HBX3 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC10.2□□□□□ -0.78
SND1-IT1Q9HBX3 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC10.2□□□□□ -0.78
SND1-IT1Q9HBX3 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SND1-IT1Q9HBX3 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SND1-IT1Q9HBX3 PLXNA1-201ENST00000393409 9066 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SND1-IT1Q9HBX3 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC10.2□□□□□ -0.78
SND1-IT1Q9HBX3 ADGRD1-201ENST00000261654 5168 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SND1-IT1Q9HBX3 KREMEN1-202ENST00000400335 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
SND1-IT1Q9HBX3 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
SND1-IT1Q9HBX3 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC10.2□□□□□ -0.78
SND1-IT1Q9HBX3 BTBD9-206ENST00000481247 8525 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
SND1-IT1Q9HBX3 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SND1-IT1Q9HBX3 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
SND1-IT1Q9HBX3 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
SND1-IT1Q9HBX3 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SND1-IT1Q9HBX3 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
SND1-IT1Q9HBX3 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SND1-IT1Q9HBX3 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
SND1-IT1Q9HBX3 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC10.2□□□□□ -0.78
SND1-IT1Q9HBX3 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC10.2□□□□□ -0.78
SND1-IT1Q9HBX3 MIR1224-201ENST00000408193 85 ntBASIC10.2□□□□□ -0.78
SND1-IT1Q9HBX3 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC10.2□□□□□ -0.78
SND1-IT1Q9HBX3 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC10.2□□□□□ -0.78
SND1-IT1Q9HBX3 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC10.2□□□□□ -0.78
SND1-IT1Q9HBX3 AKAP8P1-201ENST00000434743 1349 ntBASIC10.2□□□□□ -0.78
SND1-IT1Q9HBX3 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC10.2□□□□□ -0.78
SND1-IT1Q9HBX3 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
SND1-IT1Q9HBX3 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC10.2□□□□□ -0.78
SND1-IT1Q9HBX3 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC10.2□□□□□ -0.78
SND1-IT1Q9HBX3 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
SND1-IT1Q9HBX3 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
SND1-IT1Q9HBX3 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC10.2□□□□□ -0.78
SND1-IT1Q9HBX3 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC10.2□□□□□ -0.78
SND1-IT1Q9HBX3 AC084364.1-201ENST00000551967 1556 ntBASIC10.2□□□□□ -0.78
SND1-IT1Q9HBX3 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
SND1-IT1Q9HBX3 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
SND1-IT1Q9HBX3 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC10.2□□□□□ -0.78
SND1-IT1Q9HBX3 AC099522.2-201ENST00000607001 744 ntBASIC10.2□□□□□ -0.78
SND1-IT1Q9HBX3 AC064836.3-201ENST00000607928 673 ntBASIC10.2□□□□□ -0.78
SND1-IT1Q9HBX3 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC10.2□□□□□ -0.78
SND1-IT1Q9HBX3 AL607033.1-201ENST00000623900 1599 ntBASIC10.2□□□□□ -0.78
SND1-IT1Q9HBX3 AC008267.7-201ENST00000624570 1194 ntBASIC10.2□□□□□ -0.78
SND1-IT1Q9HBX3 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
SND1-IT1Q9HBX3 TRABD2B-202ENST00000606738 7034 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SND1-IT1Q9HBX3 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
SND1-IT1Q9HBX3 OR52A1-202ENST00000380367 9783 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
SND1-IT1Q9HBX3 TP73-201ENST00000346387 4854 ntTSL 5 BASIC10.2□□□□□ -0.78
SND1-IT1Q9HBX3 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SND1-IT1Q9HBX3 ARHGAP35-206ENST00000614079 7696 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SND1-IT1Q9HBX3 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SND1-IT1Q9HBX3 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
SND1-IT1Q9HBX3 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
SND1-IT1Q9HBX3 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SND1-IT1Q9HBX3 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SND1-IT1Q9HBX3 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC10.2□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms