Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC13.43□□□□□ -0.26
COMMD4Q9H0A8 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC13.43□□□□□ -0.26
COMMD4Q9H0A8 RET-205ENST00000615310 4337 ntTSL 5 BASIC13.43□□□□□ -0.26
COMMD4Q9H0A8 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
COMMD4Q9H0A8 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
COMMD4Q9H0A8 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
COMMD4Q9H0A8 LILRP1-201ENST00000444199 1370 ntBASIC13.43□□□□□ -0.26
COMMD4Q9H0A8 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC13.43□□□□□ -0.26
COMMD4Q9H0A8 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.43□□□□□ -0.26
COMMD4Q9H0A8 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
COMMD4Q9H0A8 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
COMMD4Q9H0A8 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
COMMD4Q9H0A8 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
COMMD4Q9H0A8 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
COMMD4Q9H0A8 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
COMMD4Q9H0A8 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
COMMD4Q9H0A8 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
COMMD4Q9H0A8 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
COMMD4Q9H0A8 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
COMMD4Q9H0A8 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC13.42□□□□□ -0.26
COMMD4Q9H0A8 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
COMMD4Q9H0A8 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
COMMD4Q9H0A8 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC13.42□□□□□ -0.26
COMMD4Q9H0A8 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC13.42□□□□□ -0.26
COMMD4Q9H0A8 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
COMMD4Q9H0A8 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC13.42□□□□□ -0.26
COMMD4Q9H0A8 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
COMMD4Q9H0A8 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
COMMD4Q9H0A8 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
COMMD4Q9H0A8 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
COMMD4Q9H0A8 CICP4-201ENST00000447359 2812 ntBASIC13.42□□□□□ -0.26
COMMD4Q9H0A8 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC13.42□□□□□ -0.26
COMMD4Q9H0A8 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
COMMD4Q9H0A8 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
COMMD4Q9H0A8 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
COMMD4Q9H0A8 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
COMMD4Q9H0A8 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
COMMD4Q9H0A8 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
COMMD4Q9H0A8 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
COMMD4Q9H0A8 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
COMMD4Q9H0A8 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
COMMD4Q9H0A8 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
COMMD4Q9H0A8 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
COMMD4Q9H0A8 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
COMMD4Q9H0A8 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
COMMD4Q9H0A8 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
COMMD4Q9H0A8 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
COMMD4Q9H0A8 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
COMMD4Q9H0A8 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC13.42□□□□□ -0.26
COMMD4Q9H0A8 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
COMMD4Q9H0A8 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
COMMD4Q9H0A8 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
COMMD4Q9H0A8 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
COMMD4Q9H0A8 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
COMMD4Q9H0A8 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC13.42□□□□□ -0.26
COMMD4Q9H0A8 SPDYE7P-202ENST00000420373 878 ntBASIC13.42□□□□□ -0.26
COMMD4Q9H0A8 COX10-202ENST00000429152 875 ntTSL 2 BASIC13.42□□□□□ -0.26
COMMD4Q9H0A8 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.42□□□□□ -0.26
COMMD4Q9H0A8 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC13.42□□□□□ -0.26
COMMD4Q9H0A8 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC13.42□□□□□ -0.26
COMMD4Q9H0A8 KRT18P64-201ENST00000434946 1219 ntBASIC13.42□□□□□ -0.26
COMMD4Q9H0A8 SPDYE14P-201ENST00000442619 822 ntBASIC13.42□□□□□ -0.26
COMMD4Q9H0A8 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC13.42□□□□□ -0.26
COMMD4Q9H0A8 AC026150.2-201ENST00000564693 1156 ntBASIC13.42□□□□□ -0.26
COMMD4Q9H0A8 AC025048.3-201ENST00000590609 569 ntBASIC13.42□□□□□ -0.26
COMMD4Q9H0A8 AC005702.4-201ENST00000618393 416 ntBASIC13.42□□□□□ -0.26
COMMD4Q9H0A8 GPR39-203ENST00000622084 900 ntTSL 5 BASIC13.42□□□□□ -0.26
COMMD4Q9H0A8 AL033527.5-202ENST00000641632 1098 ntBASIC13.42□□□□□ -0.26
COMMD4Q9H0A8 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
COMMD4Q9H0A8 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
COMMD4Q9H0A8 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
COMMD4Q9H0A8 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
COMMD4Q9H0A8 AL121723.1-201ENST00000445194 1519 ntBASIC13.42□□□□□ -0.26
COMMD4Q9H0A8 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
COMMD4Q9H0A8 AC136759.1-202ENST00000530858 2194 ntBASIC13.42□□□□□ -0.26
COMMD4Q9H0A8 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
COMMD4Q9H0A8 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
COMMD4Q9H0A8 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
COMMD4Q9H0A8 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.42□□□□□ -0.26
COMMD4Q9H0A8 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
COMMD4Q9H0A8 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC13.42□□□□□ -0.26
COMMD4Q9H0A8 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
COMMD4Q9H0A8 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC13.42□□□□□ -0.26
COMMD4Q9H0A8 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
COMMD4Q9H0A8 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
COMMD4Q9H0A8 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
COMMD4Q9H0A8 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
COMMD4Q9H0A8 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
COMMD4Q9H0A8 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
COMMD4Q9H0A8 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
COMMD4Q9H0A8 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
COMMD4Q9H0A8 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
COMMD4Q9H0A8 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
COMMD4Q9H0A8 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
COMMD4Q9H0A8 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
COMMD4Q9H0A8 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
COMMD4Q9H0A8 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
COMMD4Q9H0A8 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
COMMD4Q9H0A8 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
COMMD4Q9H0A8 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms