Protein–RNA interactions for Protein: Q9BTD1

SHANK2-AS3, Putative uncharacterized protein SHANK2-AS3, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3Q9BTD1 AC152010.1-201ENST00000415779 2006 ntBASIC11.68□□□□□ -0.54
SHANK2-AS3Q9BTD1 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC11.68□□□□□ -0.54
SHANK2-AS3Q9BTD1 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SHANK2-AS3Q9BTD1 AC138969.2-201ENST00000532739 9932 ntBASIC11.68□□□□□ -0.54
SHANK2-AS3Q9BTD1 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SHANK2-AS3Q9BTD1 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SHANK2-AS3Q9BTD1 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
SHANK2-AS3Q9BTD1 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SHANK2-AS3Q9BTD1 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
SHANK2-AS3Q9BTD1 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC11.68□□□□□ -0.54
SHANK2-AS3Q9BTD1 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
SHANK2-AS3Q9BTD1 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC11.68□□□□□ -0.54
SHANK2-AS3Q9BTD1 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC11.68□□□□□ -0.54
SHANK2-AS3Q9BTD1 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
SHANK2-AS3Q9BTD1 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SHANK2-AS3Q9BTD1 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC11.68□□□□□ -0.54
SHANK2-AS3Q9BTD1 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SHANK2-AS3Q9BTD1 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
SHANK2-AS3Q9BTD1 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
SHANK2-AS3Q9BTD1 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC11.68□□□□□ -0.54
SHANK2-AS3Q9BTD1 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SHANK2-AS3Q9BTD1 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
SHANK2-AS3Q9BTD1 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SHANK2-AS3Q9BTD1 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC11.67□□□□□ -0.54
SHANK2-AS3Q9BTD1 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
SHANK2-AS3Q9BTD1 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SHANK2-AS3Q9BTD1 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
SHANK2-AS3Q9BTD1 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SHANK2-AS3Q9BTD1 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC11.67□□□□□ -0.54
SHANK2-AS3Q9BTD1 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC11.67□□□□□ -0.54
SHANK2-AS3Q9BTD1 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
SHANK2-AS3Q9BTD1 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SHANK2-AS3Q9BTD1 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC11.67□□□□□ -0.54
SHANK2-AS3Q9BTD1 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
SHANK2-AS3Q9BTD1 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SHANK2-AS3Q9BTD1 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
SHANK2-AS3Q9BTD1 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC11.67□□□□□ -0.54
SHANK2-AS3Q9BTD1 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
SHANK2-AS3Q9BTD1 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SHANK2-AS3Q9BTD1 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
SHANK2-AS3Q9BTD1 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC11.67□□□□□ -0.54
SHANK2-AS3Q9BTD1 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC11.67□□□□□ -0.54
SHANK2-AS3Q9BTD1 WRB-204ENST00000398753 699 ntTSL 3 BASIC11.67□□□□□ -0.54
SHANK2-AS3Q9BTD1 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC11.67□□□□□ -0.54
SHANK2-AS3Q9BTD1 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC11.67□□□□□ -0.54
SHANK2-AS3Q9BTD1 AP000347.1-202ENST00000435868 847 ntBASIC11.67□□□□□ -0.54
SHANK2-AS3Q9BTD1 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
SHANK2-AS3Q9BTD1 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC11.67□□□□□ -0.54
SHANK2-AS3Q9BTD1 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC11.67□□□□□ -0.54
SHANK2-AS3Q9BTD1 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
SHANK2-AS3Q9BTD1 AC022447.6-201ENST00000515522 438 ntBASIC11.67□□□□□ -0.54
SHANK2-AS3Q9BTD1 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC11.67□□□□□ -0.54
SHANK2-AS3Q9BTD1 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC11.67□□□□□ -0.54
SHANK2-AS3Q9BTD1 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC11.67□□□□□ -0.54
SHANK2-AS3Q9BTD1 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC11.67□□□□□ -0.54
SHANK2-AS3Q9BTD1 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC11.67□□□□□ -0.54
SHANK2-AS3Q9BTD1 MPI-209ENST00000564003 1195 ntTSL 2 BASIC11.67□□□□□ -0.54
SHANK2-AS3Q9BTD1 AC140878.1-201ENST00000565277 250 ntBASIC11.67□□□□□ -0.54
SHANK2-AS3Q9BTD1 SSH2-210ENST00000582084 560 ntTSL 3 BASIC11.67□□□□□ -0.54
SHANK2-AS3Q9BTD1 AL844908.2-201ENST00000609461 460 ntBASIC11.67□□□□□ -0.54
SHANK2-AS3Q9BTD1 TEX48-202ENST00000612244 662 ntTSL 3 BASIC11.67□□□□□ -0.54
SHANK2-AS3Q9BTD1 AL158212.4-201ENST00000624062 1286 ntBASIC11.67□□□□□ -0.54
SHANK2-AS3Q9BTD1 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC11.67□□□□□ -0.54
SHANK2-AS3Q9BTD1 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
SHANK2-AS3Q9BTD1 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SHANK2-AS3Q9BTD1 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
SHANK2-AS3Q9BTD1 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC11.67□□□□□ -0.54
SHANK2-AS3Q9BTD1 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC11.67□□□□□ -0.54
SHANK2-AS3Q9BTD1 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC11.67□□□□□ -0.54
SHANK2-AS3Q9BTD1 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
SHANK2-AS3Q9BTD1 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC11.67□□□□□ -0.54
SHANK2-AS3Q9BTD1 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SHANK2-AS3Q9BTD1 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
SHANK2-AS3Q9BTD1 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
SHANK2-AS3Q9BTD1 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC11.67□□□□□ -0.54
SHANK2-AS3Q9BTD1 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SHANK2-AS3Q9BTD1 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
SHANK2-AS3Q9BTD1 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC11.67□□□□□ -0.54
SHANK2-AS3Q9BTD1 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
SHANK2-AS3Q9BTD1 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
SHANK2-AS3Q9BTD1 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SHANK2-AS3Q9BTD1 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC11.67□□□□□ -0.54
SHANK2-AS3Q9BTD1 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SHANK2-AS3Q9BTD1 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC11.67□□□□□ -0.54
SHANK2-AS3Q9BTD1 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
SHANK2-AS3Q9BTD1 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC11.67□□□□□ -0.54
SHANK2-AS3Q9BTD1 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC11.67□□□□□ -0.54
SHANK2-AS3Q9BTD1 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
SHANK2-AS3Q9BTD1 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC11.66□□□□□ -0.54
SHANK2-AS3Q9BTD1 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
SHANK2-AS3Q9BTD1 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
SHANK2-AS3Q9BTD1 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC11.66□□□□□ -0.54
SHANK2-AS3Q9BTD1 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SHANK2-AS3Q9BTD1 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC11.66□□□□□ -0.54
SHANK2-AS3Q9BTD1 AC093525.8-201ENST00000624099 1342 ntBASIC11.66□□□□□ -0.54
SHANK2-AS3Q9BTD1 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SHANK2-AS3Q9BTD1 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
SHANK2-AS3Q9BTD1 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC11.66□□□□□ -0.54
SHANK2-AS3Q9BTD1 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC11.66□□□□□ -0.54
SHANK2-AS3Q9BTD1 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC11.66□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms