Protein–RNA interactions for Protein: Q99853

FOXB1, Forkhead box protein B1, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXB1Q99853 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
FOXB1Q99853 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
FOXB1Q99853 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
FOXB1Q99853 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC13.33□□□□□ -0.28
FOXB1Q99853 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC13.33□□□□□ -0.28
FOXB1Q99853 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
FOXB1Q99853 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC13.33□□□□□ -0.28
FOXB1Q99853 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
FOXB1Q99853 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
FOXB1Q99853 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC13.32□□□□□ -0.28
FOXB1Q99853 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
FOXB1Q99853 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
FOXB1Q99853 RER1-203ENST00000378513 3000 ntTSL 3 BASIC13.32□□□□□ -0.28
FOXB1Q99853 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC13.32□□□□□ -0.28
FOXB1Q99853 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
FOXB1Q99853 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC13.32□□□□□ -0.28
FOXB1Q99853 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
FOXB1Q99853 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
FOXB1Q99853 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
FOXB1Q99853 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
FOXB1Q99853 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.32□□□□□ -0.28
FOXB1Q99853 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
FOXB1Q99853 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.32□□□□□ -0.28
FOXB1Q99853 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
FOXB1Q99853 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
FOXB1Q99853 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
FOXB1Q99853 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
FOXB1Q99853 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
FOXB1Q99853 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
FOXB1Q99853 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
FOXB1Q99853 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC13.32□□□□□ -0.28
FOXB1Q99853 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
FOXB1Q99853 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
FOXB1Q99853 EIF3FP3-201ENST00000434851 1086 ntBASIC13.32□□□□□ -0.28
FOXB1Q99853 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
FOXB1Q99853 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
FOXB1Q99853 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
FOXB1Q99853 RPS15-202ENST00000585665 467 ntTSL 3 BASIC13.32□□□□□ -0.28
FOXB1Q99853 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC13.32□□□□□ -0.28
FOXB1Q99853 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
FOXB1Q99853 AC012645.4-201ENST00000610691 1061 ntBASIC13.32□□□□□ -0.28
FOXB1Q99853 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC13.32□□□□□ -0.28
FOXB1Q99853 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC13.32□□□□□ -0.28
FOXB1Q99853 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
FOXB1Q99853 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC13.32□□□□□ -0.28
FOXB1Q99853 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
FOXB1Q99853 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC13.32□□□□□ -0.28
FOXB1Q99853 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
FOXB1Q99853 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
FOXB1Q99853 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
FOXB1Q99853 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
FOXB1Q99853 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
FOXB1Q99853 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
FOXB1Q99853 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC13.32□□□□□ -0.28
FOXB1Q99853 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
FOXB1Q99853 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC13.32□□□□□ -0.28
FOXB1Q99853 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC13.32□□□□□ -0.28
FOXB1Q99853 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
FOXB1Q99853 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
FOXB1Q99853 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
FOXB1Q99853 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
FOXB1Q99853 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
FOXB1Q99853 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
FOXB1Q99853 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
FOXB1Q99853 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
FOXB1Q99853 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC13.31□□□□□ -0.28
FOXB1Q99853 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
FOXB1Q99853 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
FOXB1Q99853 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
FOXB1Q99853 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
FOXB1Q99853 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
FOXB1Q99853 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
FOXB1Q99853 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
FOXB1Q99853 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC13.31□□□□□ -0.28
FOXB1Q99853 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
FOXB1Q99853 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
FOXB1Q99853 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
FOXB1Q99853 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
FOXB1Q99853 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC13.31□□□□□ -0.28
FOXB1Q99853 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC13.31□□□□□ -0.28
FOXB1Q99853 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC13.31□□□□□ -0.28
FOXB1Q99853 RPL28-203ENST00000428193 573 ntTSL 2 BASIC13.31□□□□□ -0.28
FOXB1Q99853 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC13.31□□□□□ -0.28
FOXB1Q99853 RPL28-204ENST00000431533 590 ntTSL 2 BASIC13.31□□□□□ -0.28
FOXB1Q99853 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC13.31□□□□□ -0.28
FOXB1Q99853 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC13.31□□□□□ -0.28
FOXB1Q99853 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC13.31□□□□□ -0.28
FOXB1Q99853 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC13.31□□□□□ -0.28
FOXB1Q99853 AP001889.1-201ENST00000525414 633 ntBASIC13.31□□□□□ -0.28
FOXB1Q99853 FUZ-207ENST00000526575 482 ntTSL 4 BASIC13.31□□□□□ -0.28
FOXB1Q99853 RPL28-207ENST00000558815 616 ntTSL 2 BASIC13.31□□□□□ -0.28
FOXB1Q99853 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC13.31□□□□□ -0.28
FOXB1Q99853 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
FOXB1Q99853 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC13.31□□□□□ -0.28
FOXB1Q99853 IGHV3-72-202ENST00000621503 303 ntBASIC13.31□□□□□ -0.28
FOXB1Q99853 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
FOXB1Q99853 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
FOXB1Q99853 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
FOXB1Q99853 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
FOXB1Q99853 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms