Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
CSMD1Q96PZ7 AL137783.1-201ENST00000623494 1896 ntBASIC12.58□□□□□ -0.39
CSMD1Q96PZ7 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CSMD1Q96PZ7 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CSMD1Q96PZ7 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.4
CSMD1Q96PZ7 NME4-203ENST00000397722 1232 ntTSL 2 BASIC12.58□□□□□ -0.4
CSMD1Q96PZ7 AC010900.1-201ENST00000449849 1296 ntBASIC12.58□□□□□ -0.4
CSMD1Q96PZ7 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC12.58□□□□□ -0.4
CSMD1Q96PZ7 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CSMD1Q96PZ7 LINC01783-202ENST00000614408 828 ntBASIC12.58□□□□□ -0.4
CSMD1Q96PZ7 BX284668.2-205ENST00000619677 828 ntBASIC12.58□□□□□ -0.4
CSMD1Q96PZ7 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CSMD1Q96PZ7 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC12.58□□□□□ -0.4
CSMD1Q96PZ7 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
CSMD1Q96PZ7 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC12.58□□□□□ -0.4
CSMD1Q96PZ7 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CSMD1Q96PZ7 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CSMD1Q96PZ7 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CSMD1Q96PZ7 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CSMD1Q96PZ7 AC112504.1-201ENST00000623415 1841 ntBASIC12.58□□□□□ -0.4
CSMD1Q96PZ7 F10-201ENST00000375551 1509 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CSMD1Q96PZ7 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC12.58□□□□□ -0.4
CSMD1Q96PZ7 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CSMD1Q96PZ7 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
CSMD1Q96PZ7 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC12.58□□□□□ -0.4
CSMD1Q96PZ7 SERPINA1-209ENST00000449399 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CSMD1Q96PZ7 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CSMD1Q96PZ7 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
CSMD1Q96PZ7 HLA-DRB5-201ENST00000374975 1260 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
CSMD1Q96PZ7 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC12.58□□□□□ -0.4
CSMD1Q96PZ7 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CSMD1Q96PZ7 AL645937.2-201ENST00000396808 931 ntBASIC12.58□□□□□ -0.4
CSMD1Q96PZ7 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC12.58□□□□□ -0.4
CSMD1Q96PZ7 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC12.58□□□□□ -0.4
CSMD1Q96PZ7 DUX4L47-201ENST00000566374 394 ntBASIC12.58□□□□□ -0.4
CSMD1Q96PZ7 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CSMD1Q96PZ7 AL365203.3-201ENST00000609742 2057 ntBASIC12.58□□□□□ -0.4
CSMD1Q96PZ7 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC12.58□□□□□ -0.4
CSMD1Q96PZ7 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC12.58□□□□□ -0.4
CSMD1Q96PZ7 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC12.58□□□□□ -0.4
CSMD1Q96PZ7 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
CSMD1Q96PZ7 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CSMD1Q96PZ7 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
CSMD1Q96PZ7 AL109809.1-201ENST00000418979 1367 ntBASIC12.58□□□□□ -0.4
CSMD1Q96PZ7 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC12.58□□□□□ -0.4
CSMD1Q96PZ7 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
CSMD1Q96PZ7 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
CSMD1Q96PZ7 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC12.58□□□□□ -0.4
CSMD1Q96PZ7 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
CSMD1Q96PZ7 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC12.58□□□□□ -0.4
CSMD1Q96PZ7 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
CSMD1Q96PZ7 KRT17P4-203ENST00000579355 621 ntTSL 3 BASIC12.58□□□□□ -0.4
CSMD1Q96PZ7 MIR3180-2-201ENST00000581748 88 ntBASIC12.58□□□□□ -0.4
CSMD1Q96PZ7 AL353997.6-201ENST00000583394 621 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CSMD1Q96PZ7 AC087392.5-201ENST00000612517 489 ntBASIC12.58□□□□□ -0.4
CSMD1Q96PZ7 PSME2-217ENST00000615264 874 ntTSL 5 BASIC12.58□□□□□ -0.4
CSMD1Q96PZ7 PSME2-218ENST00000630027 185 ntTSL 3 BASIC12.58□□□□□ -0.4
CSMD1Q96PZ7 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC12.58□□□□□ -0.4
CSMD1Q96PZ7 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC12.58□□□□□ -0.4
CSMD1Q96PZ7 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC12.57□□□□□ -0.4
CSMD1Q96PZ7 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CSMD1Q96PZ7 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CSMD1Q96PZ7 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CSMD1Q96PZ7 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC12.57□□□□□ -0.4
CSMD1Q96PZ7 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CSMD1Q96PZ7 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC12.57□□□□□ -0.4
CSMD1Q96PZ7 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CSMD1Q96PZ7 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC12.57□□□□□ -0.4
CSMD1Q96PZ7 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC12.57□□□□□ -0.4
CSMD1Q96PZ7 AC010503.4-201ENST00000615487 688 ntBASIC12.57□□□□□ -0.4
CSMD1Q96PZ7 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CSMD1Q96PZ7 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
CSMD1Q96PZ7 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC12.57□□□□□ -0.4
CSMD1Q96PZ7 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CSMD1Q96PZ7 CTBP2P8-201ENST00000422584 1330 ntBASIC12.57□□□□□ -0.4
CSMD1Q96PZ7 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
CSMD1Q96PZ7 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CSMD1Q96PZ7 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CSMD1Q96PZ7 AC105917.1-201ENST00000506637 2539 ntBASIC12.57□□□□□ -0.4
CSMD1Q96PZ7 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
CSMD1Q96PZ7 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
CSMD1Q96PZ7 AC090616.6-203ENST00000579186 1945 ntBASIC12.57□□□□□ -0.4
CSMD1Q96PZ7 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CSMD1Q96PZ7 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
CSMD1Q96PZ7 WNT5A-205ENST00000497027 1299 ntTSL 2 BASIC12.57□□□□□ -0.4
CSMD1Q96PZ7 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CSMD1Q96PZ7 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CSMD1Q96PZ7 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
CSMD1Q96PZ7 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CSMD1Q96PZ7 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CSMD1Q96PZ7 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CSMD1Q96PZ7 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CSMD1Q96PZ7 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CSMD1Q96PZ7 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
CSMD1Q96PZ7 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
CSMD1Q96PZ7 FAM227B-212ENST00000561064 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
CSMD1Q96PZ7 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
CSMD1Q96PZ7 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC12.56□□□□□ -0.4
CSMD1Q96PZ7 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC12.56□□□□□ -0.4
CSMD1Q96PZ7 AC004466.2-201ENST00000614749 516 ntBASIC12.56□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms