Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC15.31■□□□□ 0.04
CHMP6Q96FZ7 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CHMP6Q96FZ7 PIN1-206ENST00000587625 878 ntTSL 2 BASIC15.31■□□□□ 0.04
CHMP6Q96FZ7 AL513190.1-201ENST00000621254 727 ntBASIC15.31■□□□□ 0.04
CHMP6Q96FZ7 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC15.31■□□□□ 0.04
CHMP6Q96FZ7 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC15.31■□□□□ 0.04
CHMP6Q96FZ7 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC15.31■□□□□ 0.04
CHMP6Q96FZ7 CTBP1-AS2-206ENST00000581398 5652 ntBASIC15.31■□□□□ 0.04
CHMP6Q96FZ7 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
CHMP6Q96FZ7 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CHMP6Q96FZ7 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHMP6Q96FZ7 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC15.31■□□□□ 0.04
CHMP6Q96FZ7 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CHMP6Q96FZ7 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
CHMP6Q96FZ7 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC15.31■□□□□ 0.04
CHMP6Q96FZ7 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHMP6Q96FZ7 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CHMP6Q96FZ7 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
CHMP6Q96FZ7 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC15.31■□□□□ 0.04
CHMP6Q96FZ7 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CHMP6Q96FZ7 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC15.31■□□□□ 0.04
CHMP6Q96FZ7 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHMP6Q96FZ7 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC15.31■□□□□ 0.04
CHMP6Q96FZ7 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC15.31■□□□□ 0.04
CHMP6Q96FZ7 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CHMP6Q96FZ7 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC15.31■□□□□ 0.04
CHMP6Q96FZ7 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHMP6Q96FZ7 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHMP6Q96FZ7 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHMP6Q96FZ7 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
CHMP6Q96FZ7 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHMP6Q96FZ7 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CHMP6Q96FZ7 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CHMP6Q96FZ7 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CHMP6Q96FZ7 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC15.3■□□□□ 0.04
CHMP6Q96FZ7 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHMP6Q96FZ7 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHMP6Q96FZ7 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC15.3■□□□□ 0.04
CHMP6Q96FZ7 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHMP6Q96FZ7 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CHMP6Q96FZ7 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHMP6Q96FZ7 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CHMP6Q96FZ7 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHMP6Q96FZ7 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHMP6Q96FZ7 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHMP6Q96FZ7 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHMP6Q96FZ7 AL591424.1-201ENST00000442569 1213 ntBASIC15.3■□□□□ 0.04
CHMP6Q96FZ7 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHMP6Q96FZ7 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC15.3■□□□□ 0.04
CHMP6Q96FZ7 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC15.3■□□□□ 0.04
CHMP6Q96FZ7 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CHMP6Q96FZ7 AC022447.6-201ENST00000515522 438 ntBASIC15.3■□□□□ 0.04
CHMP6Q96FZ7 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CHMP6Q96FZ7 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC15.3■□□□□ 0.04
CHMP6Q96FZ7 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CHMP6Q96FZ7 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC15.3■□□□□ 0.04
CHMP6Q96FZ7 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC15.3■□□□□ 0.04
CHMP6Q96FZ7 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHMP6Q96FZ7 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CHMP6Q96FZ7 AC073389.1-201ENST00000595595 795 ntBASIC15.3■□□□□ 0.04
CHMP6Q96FZ7 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC15.3■□□□□ 0.04
CHMP6Q96FZ7 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHMP6Q96FZ7 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHMP6Q96FZ7 AL161645.1-201ENST00000622716 1255 ntBASIC15.3■□□□□ 0.04
CHMP6Q96FZ7 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC15.3■□□□□ 0.04
CHMP6Q96FZ7 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
CHMP6Q96FZ7 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHMP6Q96FZ7 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHMP6Q96FZ7 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHMP6Q96FZ7 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHMP6Q96FZ7 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CHMP6Q96FZ7 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CHMP6Q96FZ7 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHMP6Q96FZ7 Z82170.1-201ENST00000625081 3192 ntBASIC15.3■□□□□ 0.04
CHMP6Q96FZ7 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CHMP6Q96FZ7 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHMP6Q96FZ7 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHMP6Q96FZ7 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHMP6Q96FZ7 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
CHMP6Q96FZ7 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHMP6Q96FZ7 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CHMP6Q96FZ7 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC15.29■□□□□ 0.04
CHMP6Q96FZ7 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHMP6Q96FZ7 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHMP6Q96FZ7 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHMP6Q96FZ7 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CHMP6Q96FZ7 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC15.29■□□□□ 0.04
CHMP6Q96FZ7 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHMP6Q96FZ7 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC15.29■□□□□ 0.04
CHMP6Q96FZ7 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC15.29■□□□□ 0.04
CHMP6Q96FZ7 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHMP6Q96FZ7 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHMP6Q96FZ7 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC15.29■□□□□ 0.04
CHMP6Q96FZ7 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CHMP6Q96FZ7 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHMP6Q96FZ7 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHMP6Q96FZ7 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHMP6Q96FZ7 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHMP6Q96FZ7 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC15.29■□□□□ 0.04
CHMP6Q96FZ7 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms