Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC14.61□□□□□ -0.07
VPS33AQ96AX1 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC14.61□□□□□ -0.07
VPS33AQ96AX1 RPL37AP1-201ENST00000412502 279 ntBASIC14.61□□□□□ -0.07
VPS33AQ96AX1 RAD18-204ENST00000418463 563 ntTSL 4 BASIC14.61□□□□□ -0.07
VPS33AQ96AX1 RAD18-205ENST00000421052 582 ntTSL 3 BASIC14.61□□□□□ -0.07
VPS33AQ96AX1 SERBP1P3-201ENST00000459980 809 ntBASIC14.61□□□□□ -0.07
VPS33AQ96AX1 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC14.61□□□□□ -0.07
VPS33AQ96AX1 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC14.61□□□□□ -0.07
VPS33AQ96AX1 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC14.61□□□□□ -0.07
VPS33AQ96AX1 AP000344.2-201ENST00000512987 629 ntBASIC14.61□□□□□ -0.07
VPS33AQ96AX1 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC14.61□□□□□ -0.07
VPS33AQ96AX1 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
VPS33AQ96AX1 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC14.61□□□□□ -0.07
VPS33AQ96AX1 AC004835.2-201ENST00000603762 682 ntBASIC14.61□□□□□ -0.07
VPS33AQ96AX1 AL359183.1-201ENST00000623796 2132 ntBASIC14.61□□□□□ -0.07
VPS33AQ96AX1 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC14.61□□□□□ -0.07
VPS33AQ96AX1 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
VPS33AQ96AX1 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
VPS33AQ96AX1 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC14.61□□□□□ -0.07
VPS33AQ96AX1 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC14.61□□□□□ -0.07
VPS33AQ96AX1 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VPS33AQ96AX1 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
VPS33AQ96AX1 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
VPS33AQ96AX1 AC010327.5-201ENST00000586923 3061 ntBASIC14.61□□□□□ -0.07
VPS33AQ96AX1 NIN-202ENST00000324330 4364 ntTSL 5 BASIC14.61□□□□□ -0.07
VPS33AQ96AX1 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
VPS33AQ96AX1 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
VPS33AQ96AX1 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
VPS33AQ96AX1 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VPS33AQ96AX1 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VPS33AQ96AX1 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC14.6□□□□□ -0.07
VPS33AQ96AX1 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
VPS33AQ96AX1 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VPS33AQ96AX1 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VPS33AQ96AX1 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
VPS33AQ96AX1 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VPS33AQ96AX1 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC14.6□□□□□ -0.07
VPS33AQ96AX1 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VPS33AQ96AX1 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
VPS33AQ96AX1 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
VPS33AQ96AX1 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
VPS33AQ96AX1 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
VPS33AQ96AX1 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
VPS33AQ96AX1 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
VPS33AQ96AX1 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
VPS33AQ96AX1 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC14.6□□□□□ -0.07
VPS33AQ96AX1 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC14.6□□□□□ -0.07
VPS33AQ96AX1 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.6□□□□□ -0.07
VPS33AQ96AX1 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VPS33AQ96AX1 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VPS33AQ96AX1 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VPS33AQ96AX1 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VPS33AQ96AX1 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC14.6□□□□□ -0.07
VPS33AQ96AX1 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
VPS33AQ96AX1 KRT18P43-201ENST00000469825 1281 ntBASIC14.6□□□□□ -0.07
VPS33AQ96AX1 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC14.6□□□□□ -0.07
VPS33AQ96AX1 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC14.6□□□□□ -0.07
VPS33AQ96AX1 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VPS33AQ96AX1 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
VPS33AQ96AX1 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC14.6□□□□□ -0.07
VPS33AQ96AX1 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VPS33AQ96AX1 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
VPS33AQ96AX1 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC14.6□□□□□ -0.07
VPS33AQ96AX1 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
VPS33AQ96AX1 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
VPS33AQ96AX1 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
VPS33AQ96AX1 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
VPS33AQ96AX1 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.6□□□□□ -0.07
VPS33AQ96AX1 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
VPS33AQ96AX1 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VPS33AQ96AX1 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VPS33AQ96AX1 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
VPS33AQ96AX1 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
VPS33AQ96AX1 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC14.6□□□□□ -0.07
VPS33AQ96AX1 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
VPS33AQ96AX1 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
VPS33AQ96AX1 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VPS33AQ96AX1 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VPS33AQ96AX1 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
VPS33AQ96AX1 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
VPS33AQ96AX1 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
VPS33AQ96AX1 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC14.59□□□□□ -0.07
VPS33AQ96AX1 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
VPS33AQ96AX1 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC14.59□□□□□ -0.07
VPS33AQ96AX1 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
VPS33AQ96AX1 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
VPS33AQ96AX1 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
VPS33AQ96AX1 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
VPS33AQ96AX1 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
VPS33AQ96AX1 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
VPS33AQ96AX1 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
VPS33AQ96AX1 RPP21-221ENST00000428040 594 ntTSL 2 BASIC14.59□□□□□ -0.07
VPS33AQ96AX1 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC14.59□□□□□ -0.07
VPS33AQ96AX1 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC14.59□□□□□ -0.07
VPS33AQ96AX1 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC14.59□□□□□ -0.07
VPS33AQ96AX1 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC14.59□□□□□ -0.07
VPS33AQ96AX1 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
VPS33AQ96AX1 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
VPS33AQ96AX1 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC14.59□□□□□ -0.07
VPS33AQ96AX1 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms