Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
DNAAF1Q8NEP3 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC13.4□□□□□ -0.26
DNAAF1Q8NEP3 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC13.4□□□□□ -0.26
DNAAF1Q8NEP3 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC13.4□□□□□ -0.26
DNAAF1Q8NEP3 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
DNAAF1Q8NEP3 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
DNAAF1Q8NEP3 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC13.4□□□□□ -0.26
DNAAF1Q8NEP3 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC13.4□□□□□ -0.26
DNAAF1Q8NEP3 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC13.4□□□□□ -0.26
DNAAF1Q8NEP3 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
DNAAF1Q8NEP3 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
DNAAF1Q8NEP3 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
DNAAF1Q8NEP3 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
DNAAF1Q8NEP3 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC13.4□□□□□ -0.26
DNAAF1Q8NEP3 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
DNAAF1Q8NEP3 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
DNAAF1Q8NEP3 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
DNAAF1Q8NEP3 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
DNAAF1Q8NEP3 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
DNAAF1Q8NEP3 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
DNAAF1Q8NEP3 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
DNAAF1Q8NEP3 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.27
DNAAF1Q8NEP3 MFF-204ENST00000353339 2186 ntTSL 5 BASIC13.39□□□□□ -0.27
DNAAF1Q8NEP3 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
DNAAF1Q8NEP3 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
DNAAF1Q8NEP3 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC13.39□□□□□ -0.27
DNAAF1Q8NEP3 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC13.39□□□□□ -0.27
DNAAF1Q8NEP3 MPI-203ENST00000535694 1523 ntTSL 2 BASIC13.39□□□□□ -0.27
DNAAF1Q8NEP3 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
DNAAF1Q8NEP3 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
DNAAF1Q8NEP3 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
DNAAF1Q8NEP3 REXO1L4P-201ENST00000605109 1937 ntBASIC13.39□□□□□ -0.27
DNAAF1Q8NEP3 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
DNAAF1Q8NEP3 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
DNAAF1Q8NEP3 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
DNAAF1Q8NEP3 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
DNAAF1Q8NEP3 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
DNAAF1Q8NEP3 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
DNAAF1Q8NEP3 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC13.39□□□□□ -0.27
DNAAF1Q8NEP3 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
DNAAF1Q8NEP3 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
DNAAF1Q8NEP3 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
DNAAF1Q8NEP3 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC13.39□□□□□ -0.27
DNAAF1Q8NEP3 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC13.39□□□□□ -0.27
DNAAF1Q8NEP3 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
DNAAF1Q8NEP3 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC13.39□□□□□ -0.27
DNAAF1Q8NEP3 AC211486.1-202ENST00000416371 468 ntBASIC13.39□□□□□ -0.27
DNAAF1Q8NEP3 AC254562.1-201ENST00000417586 456 ntBASIC13.39□□□□□ -0.27
DNAAF1Q8NEP3 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC13.39□□□□□ -0.27
DNAAF1Q8NEP3 USP40-206ENST00000443711 628 ntTSL 2 BASIC13.39□□□□□ -0.27
DNAAF1Q8NEP3 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC13.39□□□□□ -0.27
DNAAF1Q8NEP3 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC13.39□□□□□ -0.27
DNAAF1Q8NEP3 AC211476.1-201ENST00000503899 468 ntBASIC13.39□□□□□ -0.27
DNAAF1Q8NEP3 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC13.39□□□□□ -0.27
DNAAF1Q8NEP3 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
DNAAF1Q8NEP3 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
DNAAF1Q8NEP3 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC13.39□□□□□ -0.27
DNAAF1Q8NEP3 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC13.39□□□□□ -0.27
DNAAF1Q8NEP3 MIR4453-201ENST00000584019 89 ntBASIC13.39□□□□□ -0.27
DNAAF1Q8NEP3 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
DNAAF1Q8NEP3 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC13.39□□□□□ -0.27
DNAAF1Q8NEP3 METTL23-205ENST00000588302 925 ntTSL 5 BASIC13.39□□□□□ -0.27
DNAAF1Q8NEP3 MIR6080-201ENST00000617359 66 ntBASIC13.39□□□□□ -0.27
DNAAF1Q8NEP3 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
DNAAF1Q8NEP3 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
DNAAF1Q8NEP3 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.39□□□□□ -0.27
DNAAF1Q8NEP3 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC13.39□□□□□ -0.27
DNAAF1Q8NEP3 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
DNAAF1Q8NEP3 CETN4P-206ENST00000642099 2168 ntBASIC13.39□□□□□ -0.27
DNAAF1Q8NEP3 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
DNAAF1Q8NEP3 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
DNAAF1Q8NEP3 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
DNAAF1Q8NEP3 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
DNAAF1Q8NEP3 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
DNAAF1Q8NEP3 AL359183.1-201ENST00000623796 2132 ntBASIC13.39□□□□□ -0.27
DNAAF1Q8NEP3 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC13.39□□□□□ -0.27
DNAAF1Q8NEP3 Z97205.2-201ENST00000564697 1639 ntBASIC13.39□□□□□ -0.27
DNAAF1Q8NEP3 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
DNAAF1Q8NEP3 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
DNAAF1Q8NEP3 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
DNAAF1Q8NEP3 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
DNAAF1Q8NEP3 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
DNAAF1Q8NEP3 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
DNAAF1Q8NEP3 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
DNAAF1Q8NEP3 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
DNAAF1Q8NEP3 AC018442.1-201ENST00000421439 2061 ntBASIC13.38□□□□□ -0.27
DNAAF1Q8NEP3 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
DNAAF1Q8NEP3 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC13.38□□□□□ -0.27
DNAAF1Q8NEP3 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
DNAAF1Q8NEP3 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
DNAAF1Q8NEP3 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC13.38□□□□□ -0.27
DNAAF1Q8NEP3 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
DNAAF1Q8NEP3 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
DNAAF1Q8NEP3 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
DNAAF1Q8NEP3 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
DNAAF1Q8NEP3 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
DNAAF1Q8NEP3 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
DNAAF1Q8NEP3 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
DNAAF1Q8NEP3 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC13.38□□□□□ -0.27
DNAAF1Q8NEP3 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms