Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HIPK4Q8NE63 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
HIPK4Q8NE63 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
HIPK4Q8NE63 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HIPK4Q8NE63 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HIPK4Q8NE63 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
HIPK4Q8NE63 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HIPK4Q8NE63 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC14.8□□□□□ -0.04
HIPK4Q8NE63 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC14.8□□□□□ -0.04
HIPK4Q8NE63 FAM58CP-201ENST00000435741 640 ntBASIC14.8□□□□□ -0.04
HIPK4Q8NE63 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC14.8□□□□□ -0.04
HIPK4Q8NE63 COQ9-214ENST00000567933 882 ntTSL 3 BASIC14.8□□□□□ -0.04
HIPK4Q8NE63 AP000842.3-202ENST00000569238 1080 ntBASIC14.8□□□□□ -0.04
HIPK4Q8NE63 AC026979.3-201ENST00000607315 403 ntBASIC14.8□□□□□ -0.04
HIPK4Q8NE63 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC14.8□□□□□ -0.04
HIPK4Q8NE63 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
HIPK4Q8NE63 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC14.8□□□□□ -0.04
HIPK4Q8NE63 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
HIPK4Q8NE63 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC14.8□□□□□ -0.04
HIPK4Q8NE63 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HIPK4Q8NE63 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
HIPK4Q8NE63 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.8□□□□□ -0.04
HIPK4Q8NE63 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.8□□□□□ -0.04
HIPK4Q8NE63 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
HIPK4Q8NE63 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HIPK4Q8NE63 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
HIPK4Q8NE63 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
HIPK4Q8NE63 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
HIPK4Q8NE63 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HIPK4Q8NE63 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HIPK4Q8NE63 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
HIPK4Q8NE63 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HIPK4Q8NE63 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HIPK4Q8NE63 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HIPK4Q8NE63 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HIPK4Q8NE63 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC14.79□□□□□ -0.04
HIPK4Q8NE63 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC14.79□□□□□ -0.04
HIPK4Q8NE63 Z82170.1-201ENST00000625081 3192 ntBASIC14.79□□□□□ -0.04
HIPK4Q8NE63 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HIPK4Q8NE63 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HIPK4Q8NE63 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
HIPK4Q8NE63 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HIPK4Q8NE63 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HIPK4Q8NE63 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
HIPK4Q8NE63 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
HIPK4Q8NE63 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
HIPK4Q8NE63 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
HIPK4Q8NE63 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HIPK4Q8NE63 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HIPK4Q8NE63 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
HIPK4Q8NE63 MIR346-201ENST00000362234 95 ntBASIC14.79□□□□□ -0.04
HIPK4Q8NE63 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HIPK4Q8NE63 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HIPK4Q8NE63 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HIPK4Q8NE63 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
HIPK4Q8NE63 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HIPK4Q8NE63 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC14.79□□□□□ -0.04
HIPK4Q8NE63 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC14.79□□□□□ -0.04
HIPK4Q8NE63 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC14.79□□□□□ -0.04
HIPK4Q8NE63 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC14.79□□□□□ -0.04
HIPK4Q8NE63 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
HIPK4Q8NE63 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HIPK4Q8NE63 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC14.79□□□□□ -0.04
HIPK4Q8NE63 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC14.79□□□□□ -0.04
HIPK4Q8NE63 RNF34-208ENST00000555076 593 ntTSL 3 BASIC14.79□□□□□ -0.04
HIPK4Q8NE63 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.79□□□□□ -0.04
HIPK4Q8NE63 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC14.79□□□□□ -0.04
HIPK4Q8NE63 PIN1-206ENST00000587625 878 ntTSL 2 BASIC14.79□□□□□ -0.04
HIPK4Q8NE63 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC14.79□□□□□ -0.04
HIPK4Q8NE63 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.79□□□□□ -0.04
HIPK4Q8NE63 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HIPK4Q8NE63 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
HIPK4Q8NE63 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HIPK4Q8NE63 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HIPK4Q8NE63 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HIPK4Q8NE63 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
HIPK4Q8NE63 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC14.79□□□□□ -0.04
HIPK4Q8NE63 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HIPK4Q8NE63 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HIPK4Q8NE63 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.78□□□□□ -0.04
HIPK4Q8NE63 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
HIPK4Q8NE63 AL359183.1-201ENST00000623796 2132 ntBASIC14.78□□□□□ -0.04
HIPK4Q8NE63 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
HIPK4Q8NE63 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
HIPK4Q8NE63 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HIPK4Q8NE63 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.78□□□□□ -0.04
HIPK4Q8NE63 AL359881.3-201ENST00000602640 1721 ntBASIC14.78□□□□□ -0.04
HIPK4Q8NE63 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC14.78□□□□□ -0.04
HIPK4Q8NE63 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HIPK4Q8NE63 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HIPK4Q8NE63 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
HIPK4Q8NE63 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
HIPK4Q8NE63 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
HIPK4Q8NE63 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HIPK4Q8NE63 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HIPK4Q8NE63 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HIPK4Q8NE63 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HIPK4Q8NE63 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
HIPK4Q8NE63 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HIPK4Q8NE63 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms