Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ZIC4Q8N9L1 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ZIC4Q8N9L1 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ZIC4Q8N9L1 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.34□□□□□ -0.27
ZIC4Q8N9L1 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ZIC4Q8N9L1 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ZIC4Q8N9L1 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.34□□□□□ -0.27
ZIC4Q8N9L1 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ZIC4Q8N9L1 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ZIC4Q8N9L1 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ZIC4Q8N9L1 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ZIC4Q8N9L1 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
ZIC4Q8N9L1 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ZIC4Q8N9L1 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
ZIC4Q8N9L1 RN7SKP230-201ENST00000365642 335 ntBASIC13.34□□□□□ -0.27
ZIC4Q8N9L1 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
ZIC4Q8N9L1 GZMB-202ENST00000382540 816 ntTSL 5 BASIC13.34□□□□□ -0.27
ZIC4Q8N9L1 CD8B2-202ENST00000417670 633 ntBASIC13.34□□□□□ -0.27
ZIC4Q8N9L1 RPL7P3-201ENST00000441388 714 ntBASIC13.34□□□□□ -0.27
ZIC4Q8N9L1 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC13.34□□□□□ -0.27
ZIC4Q8N9L1 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC13.34□□□□□ -0.27
ZIC4Q8N9L1 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ZIC4Q8N9L1 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC13.34□□□□□ -0.27
ZIC4Q8N9L1 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC13.34□□□□□ -0.27
ZIC4Q8N9L1 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ZIC4Q8N9L1 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
ZIC4Q8N9L1 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ZIC4Q8N9L1 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC13.34□□□□□ -0.27
ZIC4Q8N9L1 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
ZIC4Q8N9L1 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC13.34□□□□□ -0.27
ZIC4Q8N9L1 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ZIC4Q8N9L1 API5-203ENST00000455725 2257 ntTSL 2 BASIC13.34□□□□□ -0.27
ZIC4Q8N9L1 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ZIC4Q8N9L1 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ZIC4Q8N9L1 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ZIC4Q8N9L1 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ZIC4Q8N9L1 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ZIC4Q8N9L1 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC13.34□□□□□ -0.27
ZIC4Q8N9L1 AL138725.1-201ENST00000407347 1314 ntBASIC13.34□□□□□ -0.27
ZIC4Q8N9L1 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC13.34□□□□□ -0.27
ZIC4Q8N9L1 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC13.34□□□□□ -0.27
ZIC4Q8N9L1 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ZIC4Q8N9L1 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ZIC4Q8N9L1 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ZIC4Q8N9L1 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ZIC4Q8N9L1 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
ZIC4Q8N9L1 INE2-201ENST00000630399 1874 ntBASIC13.33□□□□□ -0.27
ZIC4Q8N9L1 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC13.33□□□□□ -0.27
ZIC4Q8N9L1 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
ZIC4Q8N9L1 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
ZIC4Q8N9L1 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
ZIC4Q8N9L1 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
ZIC4Q8N9L1 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ZIC4Q8N9L1 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
ZIC4Q8N9L1 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC13.33□□□□□ -0.28
ZIC4Q8N9L1 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.33□□□□□ -0.28
ZIC4Q8N9L1 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ZIC4Q8N9L1 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
ZIC4Q8N9L1 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC13.33□□□□□ -0.28
ZIC4Q8N9L1 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
ZIC4Q8N9L1 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
ZIC4Q8N9L1 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ZIC4Q8N9L1 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
ZIC4Q8N9L1 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ZIC4Q8N9L1 ANKRD19P-201ENST00000338192 862 ntBASIC13.33□□□□□ -0.28
ZIC4Q8N9L1 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
ZIC4Q8N9L1 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ZIC4Q8N9L1 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ZIC4Q8N9L1 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
ZIC4Q8N9L1 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
ZIC4Q8N9L1 BOLA2P3-201ENST00000404566 256 ntBASIC13.33□□□□□ -0.28
ZIC4Q8N9L1 SERF2-209ENST00000409646 559 ntTSL 4 BASIC13.33□□□□□ -0.28
ZIC4Q8N9L1 MIR1909-201ENST00000411312 80 ntBASIC13.33□□□□□ -0.28
ZIC4Q8N9L1 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC13.33□□□□□ -0.28
ZIC4Q8N9L1 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC13.33□□□□□ -0.28
ZIC4Q8N9L1 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC13.33□□□□□ -0.28
ZIC4Q8N9L1 ACA64.2-201ENST00000459014 129 ntBASIC13.33□□□□□ -0.28
ZIC4Q8N9L1 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
ZIC4Q8N9L1 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC13.33□□□□□ -0.28
ZIC4Q8N9L1 SNX29P1-201ENST00000548357 1007 ntBASIC13.33□□□□□ -0.28
ZIC4Q8N9L1 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC13.33□□□□□ -0.28
ZIC4Q8N9L1 AC239800.4-201ENST00000603712 296 ntBASIC13.33□□□□□ -0.28
ZIC4Q8N9L1 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC13.33□□□□□ -0.28
ZIC4Q8N9L1 PFAS-212ENST00000625942 396 ntTSL 5 BASIC13.33□□□□□ -0.28
ZIC4Q8N9L1 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC13.33□□□□□ -0.28
ZIC4Q8N9L1 AC006453.4-201ENST00000636949 1252 ntBASIC13.33□□□□□ -0.28
ZIC4Q8N9L1 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
ZIC4Q8N9L1 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ZIC4Q8N9L1 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ZIC4Q8N9L1 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ZIC4Q8N9L1 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
ZIC4Q8N9L1 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
ZIC4Q8N9L1 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ZIC4Q8N9L1 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ZIC4Q8N9L1 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
ZIC4Q8N9L1 GSN-203ENST00000373808 2664 ntTSL 2 BASIC13.33□□□□□ -0.28
ZIC4Q8N9L1 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
ZIC4Q8N9L1 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ZIC4Q8N9L1 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ZIC4Q8N9L1 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms