Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAM1L1Q8N609 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
TRAM1L1Q8N609 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRAM1L1Q8N609 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAM1L1Q8N609 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRAM1L1Q8N609 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.91□□□□□ -0.02
TRAM1L1Q8N609 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAM1L1Q8N609 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAM1L1Q8N609 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRAM1L1Q8N609 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC14.91□□□□□ -0.02
TRAM1L1Q8N609 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAM1L1Q8N609 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAM1L1Q8N609 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRAM1L1Q8N609 MIR1202-201ENST00000408529 83 ntBASIC14.91□□□□□ -0.02
TRAM1L1Q8N609 AC099336.1-201ENST00000417053 1171 ntBASIC14.91□□□□□ -0.02
TRAM1L1Q8N609 CSF2RBP1-201ENST00000447905 391 ntBASIC14.91□□□□□ -0.02
TRAM1L1Q8N609 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC14.91□□□□□ -0.02
TRAM1L1Q8N609 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC14.91□□□□□ -0.02
TRAM1L1Q8N609 MIR4259-201ENST00000584466 101 ntBASIC14.91□□□□□ -0.02
TRAM1L1Q8N609 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
TRAM1L1Q8N609 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC14.91□□□□□ -0.02
TRAM1L1Q8N609 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRAM1L1Q8N609 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC14.91□□□□□ -0.02
TRAM1L1Q8N609 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC14.91□□□□□ -0.02
TRAM1L1Q8N609 AL359881.2-201ENST00000602973 570 ntBASIC14.91□□□□□ -0.02
TRAM1L1Q8N609 AC138696.2-201ENST00000607376 223 ntBASIC14.91□□□□□ -0.02
TRAM1L1Q8N609 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAM1L1Q8N609 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC14.91□□□□□ -0.02
TRAM1L1Q8N609 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC14.91□□□□□ -0.02
TRAM1L1Q8N609 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRAM1L1Q8N609 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAM1L1Q8N609 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAM1L1Q8N609 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRAM1L1Q8N609 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAM1L1Q8N609 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAM1L1Q8N609 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAM1L1Q8N609 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAM1L1Q8N609 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAM1L1Q8N609 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.91□□□□□ -0.02
TRAM1L1Q8N609 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
TRAM1L1Q8N609 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAM1L1Q8N609 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAM1L1Q8N609 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
TRAM1L1Q8N609 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAM1L1Q8N609 AL138725.1-201ENST00000407347 1314 ntBASIC14.91□□□□□ -0.02
TRAM1L1Q8N609 FKBP4P6-201ENST00000457486 1332 ntBASIC14.91□□□□□ -0.02
TRAM1L1Q8N609 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAM1L1Q8N609 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.9□□□□□ -0.02
TRAM1L1Q8N609 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
TRAM1L1Q8N609 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAM1L1Q8N609 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14.9□□□□□ -0.02
TRAM1L1Q8N609 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAM1L1Q8N609 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRAM1L1Q8N609 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAM1L1Q8N609 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAM1L1Q8N609 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC14.9□□□□□ -0.02
TRAM1L1Q8N609 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRAM1L1Q8N609 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRAM1L1Q8N609 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC14.9□□□□□ -0.02
TRAM1L1Q8N609 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAM1L1Q8N609 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAM1L1Q8N609 SNX21-203ENST00000372541 771 ntTSL 2 BASIC14.9□□□□□ -0.02
TRAM1L1Q8N609 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC14.9□□□□□ -0.02
TRAM1L1Q8N609 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAM1L1Q8N609 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC14.9□□□□□ -0.02
TRAM1L1Q8N609 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
TRAM1L1Q8N609 HLA-V-201ENST00000429037 534 ntBASIC14.9□□□□□ -0.02
TRAM1L1Q8N609 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC14.9□□□□□ -0.02
TRAM1L1Q8N609 AL391280.1-201ENST00000506969 1062 ntBASIC14.9□□□□□ -0.02
TRAM1L1Q8N609 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC14.9□□□□□ -0.02
TRAM1L1Q8N609 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
TRAM1L1Q8N609 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC14.9□□□□□ -0.02
TRAM1L1Q8N609 OR10B1P-201ENST00000601666 907 ntBASIC14.9□□□□□ -0.02
TRAM1L1Q8N609 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAM1L1Q8N609 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAM1L1Q8N609 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAM1L1Q8N609 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAM1L1Q8N609 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAM1L1Q8N609 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAM1L1Q8N609 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC14.9□□□□□ -0.02
TRAM1L1Q8N609 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRAM1L1Q8N609 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAM1L1Q8N609 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
TRAM1L1Q8N609 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
TRAM1L1Q8N609 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.9□□□□□ -0.02
TRAM1L1Q8N609 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC14.9□□□□□ -0.02
TRAM1L1Q8N609 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC14.89□□□□□ -0.03
TRAM1L1Q8N609 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAM1L1Q8N609 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.89□□□□□ -0.03
TRAM1L1Q8N609 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.89□□□□□ -0.03
TRAM1L1Q8N609 AC003102.2-201ENST00000589195 1469 ntBASIC14.89□□□□□ -0.03
TRAM1L1Q8N609 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRAM1L1Q8N609 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAM1L1Q8N609 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAM1L1Q8N609 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC14.89□□□□□ -0.03
TRAM1L1Q8N609 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRAM1L1Q8N609 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAM1L1Q8N609 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.89□□□□□ -0.03
TRAM1L1Q8N609 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.89□□□□□ -0.03
TRAM1L1Q8N609 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms