Protein–RNA interactions for Protein: Q5VV42

CDKAL1, Threonylcarbamoyladenosine tRNA methylthiotransferase, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1Q5VV42 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.51■□□□□ 0.23
CDKAL1Q5VV42 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDKAL1Q5VV42 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CDKAL1Q5VV42 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC16.51■□□□□ 0.23
CDKAL1Q5VV42 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDKAL1Q5VV42 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDKAL1Q5VV42 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDKAL1Q5VV42 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC16.51■□□□□ 0.23
CDKAL1Q5VV42 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDKAL1Q5VV42 AC012617.1-204ENST00000586340 2305 ntBASIC16.51■□□□□ 0.23
CDKAL1Q5VV42 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDKAL1Q5VV42 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDKAL1Q5VV42 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CDKAL1Q5VV42 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDKAL1Q5VV42 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDKAL1Q5VV42 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDKAL1Q5VV42 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.5■□□□□ 0.23
CDKAL1Q5VV42 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDKAL1Q5VV42 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDKAL1Q5VV42 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC16.5■□□□□ 0.23
CDKAL1Q5VV42 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CDKAL1Q5VV42 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
CDKAL1Q5VV42 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
CDKAL1Q5VV42 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC16.5■□□□□ 0.23
CDKAL1Q5VV42 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDKAL1Q5VV42 RNU1-114P-201ENST00000365297 166 ntBASIC16.5■□□□□ 0.23
CDKAL1Q5VV42 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CDKAL1Q5VV42 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC16.5■□□□□ 0.23
CDKAL1Q5VV42 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDKAL1Q5VV42 BRF1-202ENST00000379932 884 ntTSL 5 BASIC16.5■□□□□ 0.23
CDKAL1Q5VV42 B9D1-203ENST00000395615 805 ntTSL 3 BASIC16.5■□□□□ 0.23
CDKAL1Q5VV42 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC16.5■□□□□ 0.23
CDKAL1Q5VV42 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC16.5■□□□□ 0.23
CDKAL1Q5VV42 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC16.5■□□□□ 0.23
CDKAL1Q5VV42 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
CDKAL1Q5VV42 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDKAL1Q5VV42 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC16.5■□□□□ 0.23
CDKAL1Q5VV42 TPRX2P-201ENST00000535362 881 ntBASIC16.5■□□□□ 0.23
CDKAL1Q5VV42 AC120045.2-201ENST00000567334 178 ntBASIC16.5■□□□□ 0.23
CDKAL1Q5VV42 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC16.5■□□□□ 0.23
CDKAL1Q5VV42 SPDYE22P-201ENST00000582158 798 ntBASIC16.5■□□□□ 0.23
CDKAL1Q5VV42 AC092364.2-202ENST00000597012 1073 ntBASIC16.5■□□□□ 0.23
CDKAL1Q5VV42 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC16.5■□□□□ 0.23
CDKAL1Q5VV42 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
CDKAL1Q5VV42 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC16.5■□□□□ 0.23
CDKAL1Q5VV42 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CDKAL1Q5VV42 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CDKAL1Q5VV42 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDKAL1Q5VV42 INE2-201ENST00000630399 1874 ntBASIC16.5■□□□□ 0.23
CDKAL1Q5VV42 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC16.5■□□□□ 0.23
CDKAL1Q5VV42 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC16.5■□□□□ 0.23
CDKAL1Q5VV42 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDKAL1Q5VV42 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDKAL1Q5VV42 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDKAL1Q5VV42 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDKAL1Q5VV42 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
CDKAL1Q5VV42 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDKAL1Q5VV42 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC16.49■□□□□ 0.23
CDKAL1Q5VV42 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CDKAL1Q5VV42 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDKAL1Q5VV42 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CDKAL1Q5VV42 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDKAL1Q5VV42 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC16.49■□□□□ 0.23
CDKAL1Q5VV42 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDKAL1Q5VV42 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC16.49■□□□□ 0.23
CDKAL1Q5VV42 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC16.49■□□□□ 0.23
CDKAL1Q5VV42 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CDKAL1Q5VV42 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CDKAL1Q5VV42 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CDKAL1Q5VV42 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDKAL1Q5VV42 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDKAL1Q5VV42 URGCP-206ENST00000446958 365 ntTSL 2 BASIC16.49■□□□□ 0.23
CDKAL1Q5VV42 RPL13AP25-201ENST00000484130 612 ntBASIC16.49■□□□□ 0.23
CDKAL1Q5VV42 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CDKAL1Q5VV42 DOC2GP-202ENST00000514950 1163 ntBASIC16.49■□□□□ 0.23
CDKAL1Q5VV42 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CDKAL1Q5VV42 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
CDKAL1Q5VV42 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC16.49■□□□□ 0.23
CDKAL1Q5VV42 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDKAL1Q5VV42 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC16.49■□□□□ 0.23
CDKAL1Q5VV42 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC16.49■□□□□ 0.23
CDKAL1Q5VV42 RRP7BP-205ENST00000566851 833 ntBASIC16.49■□□□□ 0.23
CDKAL1Q5VV42 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC16.49■□□□□ 0.23
CDKAL1Q5VV42 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC16.49■□□□□ 0.23
CDKAL1Q5VV42 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC16.49■□□□□ 0.23
CDKAL1Q5VV42 INTS4P2-202ENST00000614726 2019 ntBASIC16.49■□□□□ 0.23
CDKAL1Q5VV42 AC007431.3-201ENST00000623221 587 ntBASIC16.49■□□□□ 0.23
CDKAL1Q5VV42 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CDKAL1Q5VV42 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CDKAL1Q5VV42 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDKAL1Q5VV42 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC16.49■□□□□ 0.23
CDKAL1Q5VV42 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDKAL1Q5VV42 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC16.49■□□□□ 0.23
CDKAL1Q5VV42 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDKAL1Q5VV42 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CDKAL1Q5VV42 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CDKAL1Q5VV42 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC16.49■□□□□ 0.23
CDKAL1Q5VV42 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDKAL1Q5VV42 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CDKAL1Q5VV42 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms