Protein–RNA interactions for Protein: Q08722

CD47, Leukocyte surface antigen CD47, humanhuman

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD47Q08722 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14.13□□□□□ -0.15
CD47Q08722 AC004967.1-201ENST00000453589 447 ntBASIC14.13□□□□□ -0.15
CD47Q08722 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC14.13□□□□□ -0.15
CD47Q08722 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CD47Q08722 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CD47Q08722 LITAF-210ENST00000571976 548 ntTSL 2 BASIC14.13□□□□□ -0.15
CD47Q08722 LITAF-214ENST00000574703 486 ntTSL 2 BASIC14.13□□□□□ -0.15
CD47Q08722 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CD47Q08722 AL596442.2-201ENST00000610240 980 ntBASIC14.13□□□□□ -0.15
CD47Q08722 RAB34-224ENST00000636513 888 ntTSL 5 BASIC14.13□□□□□ -0.15
CD47Q08722 AC134684.3-201ENST00000641758 218 ntBASIC14.13□□□□□ -0.15
CD47Q08722 AC105206.1-202ENST00000314927 2368 ntBASIC14.13□□□□□ -0.15
CD47Q08722 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC14.13□□□□□ -0.15
CD47Q08722 AC067750.1-201ENST00000608826 6545 ntBASIC14.13□□□□□ -0.15
CD47Q08722 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CD47Q08722 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CD47Q08722 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CD47Q08722 LSS-211ENST00000522411 2523 ntTSL 2 BASIC14.13□□□□□ -0.15
CD47Q08722 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC14.13□□□□□ -0.15
CD47Q08722 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CD47Q08722 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CD47Q08722 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CD47Q08722 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
CD47Q08722 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
CD47Q08722 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
CD47Q08722 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CD47Q08722 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CD47Q08722 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC14.13□□□□□ -0.15
CD47Q08722 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CD47Q08722 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
CD47Q08722 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CD47Q08722 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CD47Q08722 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CD47Q08722 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
CD47Q08722 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
CD47Q08722 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CD47Q08722 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.12□□□□□ -0.15
CD47Q08722 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CD47Q08722 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CD47Q08722 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CD47Q08722 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CD47Q08722 AL035456.1-201ENST00000456064 1369 ntBASIC14.12□□□□□ -0.15
CD47Q08722 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CD47Q08722 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CD47Q08722 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC14.12□□□□□ -0.15
CD47Q08722 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CD47Q08722 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CD47Q08722 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
CD47Q08722 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CD47Q08722 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC14.12□□□□□ -0.15
CD47Q08722 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CD47Q08722 KLK8-202ENST00000320838 456 ntTSL 5 BASIC14.12□□□□□ -0.15
CD47Q08722 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
CD47Q08722 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CD47Q08722 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC14.12□□□□□ -0.15
CD47Q08722 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC14.12□□□□□ -0.15
CD47Q08722 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CD47Q08722 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CD47Q08722 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC14.12□□□□□ -0.15
CD47Q08722 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC14.12□□□□□ -0.15
CD47Q08722 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CD47Q08722 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.12□□□□□ -0.15
CD47Q08722 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC14.12□□□□□ -0.15
CD47Q08722 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC14.12□□□□□ -0.15
CD47Q08722 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC14.12□□□□□ -0.15
CD47Q08722 AC007967.4-201ENST00000614700 386 ntBASIC14.12□□□□□ -0.15
CD47Q08722 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CD47Q08722 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC14.12□□□□□ -0.15
CD47Q08722 SERF2-217ENST00000630046 862 ntTSL 5 BASIC14.12□□□□□ -0.15
CD47Q08722 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
CD47Q08722 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CD47Q08722 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CD47Q08722 AC027612.1-201ENST00000445234 2395 ntBASIC14.12□□□□□ -0.15
CD47Q08722 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC14.12□□□□□ -0.15
CD47Q08722 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CD47Q08722 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC14.12□□□□□ -0.15
CD47Q08722 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CD47Q08722 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CD47Q08722 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CD47Q08722 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CD47Q08722 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC14.12□□□□□ -0.15
CD47Q08722 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CD47Q08722 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CD47Q08722 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CD47Q08722 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CD47Q08722 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CD47Q08722 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CD47Q08722 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CD47Q08722 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
CD47Q08722 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CD47Q08722 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CD47Q08722 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CD47Q08722 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CD47Q08722 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
CD47Q08722 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
CD47Q08722 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CD47Q08722 AC023090.2-201ENST00000625182 2110 ntBASIC14.11□□□□□ -0.15
CD47Q08722 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
CD47Q08722 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CD47Q08722 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms