Protein–RNA interactions for Protein: Q04323

UBXN1, UBX domain-containing protein 1, humanhuman

Predictions only

Length 297 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1Q04323 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
UBXN1Q04323 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBXN1Q04323 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBXN1Q04323 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBXN1Q04323 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC16.62■□□□□ 0.25
UBXN1Q04323 AC015802.1-201ENST00000588104 1449 ntBASIC16.62■□□□□ 0.25
UBXN1Q04323 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBXN1Q04323 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
UBXN1Q04323 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC16.62■□□□□ 0.25
UBXN1Q04323 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBXN1Q04323 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBXN1Q04323 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
UBXN1Q04323 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
UBXN1Q04323 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBXN1Q04323 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBXN1Q04323 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
UBXN1Q04323 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBXN1Q04323 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBXN1Q04323 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
UBXN1Q04323 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
UBXN1Q04323 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
UBXN1Q04323 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.62■□□□□ 0.25
UBXN1Q04323 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
UBXN1Q04323 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC16.62■□□□□ 0.25
UBXN1Q04323 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.62■□□□□ 0.25
UBXN1Q04323 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
UBXN1Q04323 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC16.62■□□□□ 0.25
UBXN1Q04323 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC16.62■□□□□ 0.25
UBXN1Q04323 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16.62■□□□□ 0.25
UBXN1Q04323 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC16.62■□□□□ 0.25
UBXN1Q04323 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC16.62■□□□□ 0.25
UBXN1Q04323 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.62■□□□□ 0.25
UBXN1Q04323 AC097493.3-201ENST00000509725 367 ntBASIC16.62■□□□□ 0.25
UBXN1Q04323 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBXN1Q04323 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC16.62■□□□□ 0.25
UBXN1Q04323 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC16.62■□□□□ 0.25
UBXN1Q04323 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC16.62■□□□□ 0.25
UBXN1Q04323 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC16.62■□□□□ 0.25
UBXN1Q04323 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC16.62■□□□□ 0.25
UBXN1Q04323 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC16.62■□□□□ 0.25
UBXN1Q04323 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
UBXN1Q04323 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC16.62■□□□□ 0.25
UBXN1Q04323 AL158212.4-201ENST00000624062 1286 ntBASIC16.62■□□□□ 0.25
UBXN1Q04323 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
UBXN1Q04323 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
UBXN1Q04323 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
UBXN1Q04323 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC16.62■□□□□ 0.25
UBXN1Q04323 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC16.62■□□□□ 0.25
UBXN1Q04323 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBXN1Q04323 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBXN1Q04323 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
UBXN1Q04323 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBXN1Q04323 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
UBXN1Q04323 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC16.62■□□□□ 0.25
UBXN1Q04323 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBXN1Q04323 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBXN1Q04323 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBXN1Q04323 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBXN1Q04323 AC100757.3-201ENST00000622361 1406 ntBASIC16.62■□□□□ 0.25
UBXN1Q04323 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
UBXN1Q04323 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBXN1Q04323 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
UBXN1Q04323 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
UBXN1Q04323 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
UBXN1Q04323 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
UBXN1Q04323 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
UBXN1Q04323 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBXN1Q04323 AC136759.1-202ENST00000530858 2194 ntBASIC16.61■□□□□ 0.25
UBXN1Q04323 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC16.61■□□□□ 0.25
UBXN1Q04323 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBXN1Q04323 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC16.61■□□□□ 0.25
UBXN1Q04323 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBXN1Q04323 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
UBXN1Q04323 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
UBXN1Q04323 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBXN1Q04323 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC16.61■□□□□ 0.25
UBXN1Q04323 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
UBXN1Q04323 AC114501.2-201ENST00000439631 535 ntBASIC16.61■□□□□ 0.25
UBXN1Q04323 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC16.61■□□□□ 0.25
UBXN1Q04323 GAPDHP40-201ENST00000505218 1006 ntBASIC16.61■□□□□ 0.25
UBXN1Q04323 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.61■□□□□ 0.25
UBXN1Q04323 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC16.61■□□□□ 0.25
UBXN1Q04323 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC16.61■□□□□ 0.25
UBXN1Q04323 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
UBXN1Q04323 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
UBXN1Q04323 AL590560.3-201ENST00000623350 461 ntBASIC16.61■□□□□ 0.25
UBXN1Q04323 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBXN1Q04323 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBXN1Q04323 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBXN1Q04323 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
UBXN1Q04323 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC16.61■□□□□ 0.25
UBXN1Q04323 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBXN1Q04323 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC16.61■□□□□ 0.25
UBXN1Q04323 AC018665.1-201ENST00000622927 1362 ntBASIC16.61■□□□□ 0.25
UBXN1Q04323 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBXN1Q04323 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBXN1Q04323 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC16.61■□□□□ 0.25
UBXN1Q04323 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
UBXN1Q04323 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBXN1Q04323 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms