Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC14.63□□□□□ -0.07
HMGCS1Q01581 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HMGCS1Q01581 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC14.63□□□□□ -0.07
HMGCS1Q01581 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC14.63□□□□□ -0.07
HMGCS1Q01581 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC14.63□□□□□ -0.07
HMGCS1Q01581 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
HMGCS1Q01581 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
HMGCS1Q01581 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
HMGCS1Q01581 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.63□□□□□ -0.07
HMGCS1Q01581 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
HMGCS1Q01581 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
HMGCS1Q01581 AC093525.8-201ENST00000624099 1342 ntBASIC14.63□□□□□ -0.07
HMGCS1Q01581 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HMGCS1Q01581 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC14.63□□□□□ -0.07
HMGCS1Q01581 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HMGCS1Q01581 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC14.63□□□□□ -0.07
HMGCS1Q01581 ABR-228ENST00000574437 3196 ntTSL 5 BASIC14.63□□□□□ -0.07
HMGCS1Q01581 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.63□□□□□ -0.07
HMGCS1Q01581 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HMGCS1Q01581 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HMGCS1Q01581 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
HMGCS1Q01581 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC14.62□□□□□ -0.07
HMGCS1Q01581 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC14.62□□□□□ -0.07
HMGCS1Q01581 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HMGCS1Q01581 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC14.62□□□□□ -0.07
HMGCS1Q01581 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HMGCS1Q01581 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
HMGCS1Q01581 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
HMGCS1Q01581 AL138799.1-201ENST00000448213 1675 ntBASIC14.62□□□□□ -0.07
HMGCS1Q01581 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
HMGCS1Q01581 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
HMGCS1Q01581 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
HMGCS1Q01581 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HMGCS1Q01581 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
HMGCS1Q01581 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HMGCS1Q01581 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
HMGCS1Q01581 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC14.62□□□□□ -0.07
HMGCS1Q01581 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
HMGCS1Q01581 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HMGCS1Q01581 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HMGCS1Q01581 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC14.62□□□□□ -0.07
HMGCS1Q01581 AL353779.1-201ENST00000434793 351 ntBASIC14.62□□□□□ -0.07
HMGCS1Q01581 TMPRSS11CP-201ENST00000453277 683 ntBASIC14.62□□□□□ -0.07
HMGCS1Q01581 RN7SL399P-201ENST00000471648 279 ntBASIC14.62□□□□□ -0.07
HMGCS1Q01581 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC14.62□□□□□ -0.07
HMGCS1Q01581 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC14.62□□□□□ -0.07
HMGCS1Q01581 AC026410.3-201ENST00000514280 936 ntBASIC14.62□□□□□ -0.07
HMGCS1Q01581 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC14.62□□□□□ -0.07
HMGCS1Q01581 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
HMGCS1Q01581 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
HMGCS1Q01581 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC14.62□□□□□ -0.07
HMGCS1Q01581 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC14.62□□□□□ -0.07
HMGCS1Q01581 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
HMGCS1Q01581 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
HMGCS1Q01581 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
HMGCS1Q01581 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
HMGCS1Q01581 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HMGCS1Q01581 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HMGCS1Q01581 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC14.61□□□□□ -0.07
HMGCS1Q01581 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HMGCS1Q01581 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.61□□□□□ -0.07
HMGCS1Q01581 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HMGCS1Q01581 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HMGCS1Q01581 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
HMGCS1Q01581 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
HMGCS1Q01581 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HMGCS1Q01581 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC14.61□□□□□ -0.07
HMGCS1Q01581 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HMGCS1Q01581 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HMGCS1Q01581 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.61□□□□□ -0.07
HMGCS1Q01581 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HMGCS1Q01581 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
HMGCS1Q01581 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
HMGCS1Q01581 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HMGCS1Q01581 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC14.61□□□□□ -0.07
HMGCS1Q01581 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HMGCS1Q01581 SPDYE19P-201ENST00000338590 713 ntBASIC14.61□□□□□ -0.07
HMGCS1Q01581 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
HMGCS1Q01581 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC14.61□□□□□ -0.07
HMGCS1Q01581 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC14.61□□□□□ -0.07
HMGCS1Q01581 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC14.61□□□□□ -0.07
HMGCS1Q01581 GNAQP1-201ENST00000444815 1067 ntBASIC14.61□□□□□ -0.07
HMGCS1Q01581 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC14.61□□□□□ -0.07
HMGCS1Q01581 RHOA-206ENST00000454011 889 ntTSL 2 BASIC14.61□□□□□ -0.07
HMGCS1Q01581 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC14.61□□□□□ -0.07
HMGCS1Q01581 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC14.61□□□□□ -0.07
HMGCS1Q01581 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HMGCS1Q01581 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC14.61□□□□□ -0.07
HMGCS1Q01581 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC14.61□□□□□ -0.07
HMGCS1Q01581 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HMGCS1Q01581 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC14.61□□□□□ -0.07
HMGCS1Q01581 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HMGCS1Q01581 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
HMGCS1Q01581 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.61□□□□□ -0.07
HMGCS1Q01581 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HMGCS1Q01581 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HMGCS1Q01581 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HMGCS1Q01581 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HMGCS1Q01581 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
HMGCS1Q01581 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms