Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CDKL1Q00532 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC14.94□□□□□ -0.02
CDKL1Q00532 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDKL1Q00532 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDKL1Q00532 AL138799.1-201ENST00000448213 1675 ntBASIC14.93□□□□□ -0.02
CDKL1Q00532 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CDKL1Q00532 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDKL1Q00532 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC14.93□□□□□ -0.02
CDKL1Q00532 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDKL1Q00532 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDKL1Q00532 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CDKL1Q00532 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
CDKL1Q00532 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDKL1Q00532 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDKL1Q00532 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
CDKL1Q00532 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDKL1Q00532 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDKL1Q00532 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDKL1Q00532 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDKL1Q00532 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDKL1Q00532 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CDKL1Q00532 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDKL1Q00532 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CDKL1Q00532 MIR770-201ENST00000390219 98 ntBASIC14.93□□□□□ -0.02
CDKL1Q00532 OSM-203ENST00000403463 464 ntTSL 3 BASIC14.93□□□□□ -0.02
CDKL1Q00532 NUS1P3-201ENST00000423502 862 ntBASIC14.93□□□□□ -0.02
CDKL1Q00532 SPTLC1P1-201ENST00000447199 261 ntBASIC14.93□□□□□ -0.02
CDKL1Q00532 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC14.93□□□□□ -0.02
CDKL1Q00532 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC14.93□□□□□ -0.02
CDKL1Q00532 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CDKL1Q00532 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC14.93□□□□□ -0.02
CDKL1Q00532 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC14.93□□□□□ -0.02
CDKL1Q00532 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC14.93□□□□□ -0.02
CDKL1Q00532 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDKL1Q00532 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CDKL1Q00532 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC14.93□□□□□ -0.02
CDKL1Q00532 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDKL1Q00532 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.93□□□□□ -0.02
CDKL1Q00532 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDKL1Q00532 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
CDKL1Q00532 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC14.93□□□□□ -0.02
CDKL1Q00532 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.93□□□□□ -0.02
CDKL1Q00532 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDKL1Q00532 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDKL1Q00532 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDKL1Q00532 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDKL1Q00532 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDKL1Q00532 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CDKL1Q00532 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
CDKL1Q00532 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDKL1Q00532 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDKL1Q00532 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CDKL1Q00532 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDKL1Q00532 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDKL1Q00532 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC14.92□□□□□ -0.02
CDKL1Q00532 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDKL1Q00532 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC14.92□□□□□ -0.02
CDKL1Q00532 BX640514.1-201ENST00000583223 1918 ntBASIC14.92□□□□□ -0.02
CDKL1Q00532 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDKL1Q00532 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CDKL1Q00532 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
CDKL1Q00532 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDKL1Q00532 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.92□□□□□ -0.02
CDKL1Q00532 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CDKL1Q00532 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CDKL1Q00532 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC14.92□□□□□ -0.02
CDKL1Q00532 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC14.92□□□□□ -0.02
CDKL1Q00532 DFFBP1-201ENST00000433250 979 ntBASIC14.92□□□□□ -0.02
CDKL1Q00532 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC14.92□□□□□ -0.02
CDKL1Q00532 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDKL1Q00532 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDKL1Q00532 VDAC1P7-201ENST00000462417 847 ntBASIC14.92□□□□□ -0.02
CDKL1Q00532 FADS2-205ENST00000517839 469 ntTSL 3 BASIC14.92□□□□□ -0.02
CDKL1Q00532 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC14.92□□□□□ -0.02
CDKL1Q00532 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC14.92□□□□□ -0.02
CDKL1Q00532 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC14.92□□□□□ -0.02
CDKL1Q00532 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
CDKL1Q00532 HFE2-206ENST00000634927 506 ntTSL 4 BASIC14.92□□□□□ -0.02
CDKL1Q00532 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC14.92□□□□□ -0.02
CDKL1Q00532 LILRP1-201ENST00000444199 1370 ntBASIC14.92□□□□□ -0.02
CDKL1Q00532 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.92□□□□□ -0.02
CDKL1Q00532 AL391825.1-201ENST00000457671 1364 ntBASIC14.92□□□□□ -0.02
CDKL1Q00532 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC14.92□□□□□ -0.02
CDKL1Q00532 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDKL1Q00532 AC136759.1-202ENST00000530858 2194 ntBASIC14.92□□□□□ -0.02
CDKL1Q00532 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC14.92□□□□□ -0.02
CDKL1Q00532 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CDKL1Q00532 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
CDKL1Q00532 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CDKL1Q00532 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.92□□□□□ -0.02
CDKL1Q00532 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDKL1Q00532 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
CDKL1Q00532 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC14.92□□□□□ -0.02
CDKL1Q00532 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC14.92□□□□□ -0.02
CDKL1Q00532 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.92□□□□□ -0.02
CDKL1Q00532 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CDKL1Q00532 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDKL1Q00532 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDKL1Q00532 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDKL1Q00532 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms