Protein–RNA interactions for Protein: P98172

EFNB1, Ephrin-B1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1P98172 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC13.49□□□□□ -0.25
EFNB1P98172 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC13.49□□□□□ -0.25
EFNB1P98172 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
EFNB1P98172 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
EFNB1P98172 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
EFNB1P98172 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
EFNB1P98172 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
EFNB1P98172 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
EFNB1P98172 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
EFNB1P98172 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
EFNB1P98172 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
EFNB1P98172 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
EFNB1P98172 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
EFNB1P98172 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
EFNB1P98172 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
EFNB1P98172 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
EFNB1P98172 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
EFNB1P98172 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
EFNB1P98172 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC13.48□□□□□ -0.25
EFNB1P98172 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
EFNB1P98172 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
EFNB1P98172 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC13.48□□□□□ -0.25
EFNB1P98172 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
EFNB1P98172 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC13.48□□□□□ -0.25
EFNB1P98172 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
EFNB1P98172 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC13.48□□□□□ -0.25
EFNB1P98172 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
EFNB1P98172 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC13.48□□□□□ -0.25
EFNB1P98172 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC13.48□□□□□ -0.25
EFNB1P98172 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
EFNB1P98172 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
EFNB1P98172 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
EFNB1P98172 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC13.48□□□□□ -0.25
EFNB1P98172 RPSAP43-201ENST00000402237 625 ntBASIC13.48□□□□□ -0.25
EFNB1P98172 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC13.48□□□□□ -0.25
EFNB1P98172 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC13.48□□□□□ -0.25
EFNB1P98172 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC13.48□□□□□ -0.25
EFNB1P98172 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC13.48□□□□□ -0.25
EFNB1P98172 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
EFNB1P98172 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
EFNB1P98172 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
EFNB1P98172 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
EFNB1P98172 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC13.48□□□□□ -0.25
EFNB1P98172 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC13.48□□□□□ -0.25
EFNB1P98172 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
EFNB1P98172 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
EFNB1P98172 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC13.48□□□□□ -0.25
EFNB1P98172 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
EFNB1P98172 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC13.48□□□□□ -0.25
EFNB1P98172 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
EFNB1P98172 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
EFNB1P98172 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
EFNB1P98172 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
EFNB1P98172 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
EFNB1P98172 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC13.48□□□□□ -0.25
EFNB1P98172 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
EFNB1P98172 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
EFNB1P98172 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
EFNB1P98172 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC13.47□□□□□ -0.25
EFNB1P98172 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
EFNB1P98172 RERG-209ENST00000546331 1383 ntTSL 2 BASIC13.47□□□□□ -0.25
EFNB1P98172 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
EFNB1P98172 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
EFNB1P98172 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
EFNB1P98172 AC079781.5-202ENST00000641784 3743 ntBASIC13.47□□□□□ -0.25
EFNB1P98172 TCAF1P1-201ENST00000414990 2232 ntBASIC13.47□□□□□ -0.25
EFNB1P98172 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
EFNB1P98172 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
EFNB1P98172 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
EFNB1P98172 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
EFNB1P98172 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
EFNB1P98172 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
EFNB1P98172 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
EFNB1P98172 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
EFNB1P98172 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
EFNB1P98172 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC13.47□□□□□ -0.25
EFNB1P98172 LSM5-207ENST00000410044 687 ntTSL 3 BASIC13.47□□□□□ -0.25
EFNB1P98172 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
EFNB1P98172 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
EFNB1P98172 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC13.47□□□□□ -0.25
EFNB1P98172 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC13.47□□□□□ -0.25
EFNB1P98172 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
EFNB1P98172 RAB35-202ENST00000534951 939 ntTSL 2 BASIC13.47□□□□□ -0.25
EFNB1P98172 MPI-209ENST00000564003 1195 ntTSL 2 BASIC13.47□□□□□ -0.25
EFNB1P98172 SSH2-210ENST00000582084 560 ntTSL 3 BASIC13.47□□□□□ -0.25
EFNB1P98172 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC13.47□□□□□ -0.25
EFNB1P98172 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC13.47□□□□□ -0.25
EFNB1P98172 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC13.47□□□□□ -0.25
EFNB1P98172 AL359183.1-201ENST00000623796 2132 ntBASIC13.47□□□□□ -0.25
EFNB1P98172 AC073592.8-201ENST00000624126 511 ntBASIC13.47□□□□□ -0.25
EFNB1P98172 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
EFNB1P98172 AC215219.1-201ENST00000400706 1817 ntBASIC13.47□□□□□ -0.25
EFNB1P98172 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
EFNB1P98172 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
EFNB1P98172 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
EFNB1P98172 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
EFNB1P98172 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
EFNB1P98172 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
EFNB1P98172 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
EFNB1P98172 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms