Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC17.65■□□□□ 0.42
IRX3P78415 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
IRX3P78415 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
IRX3P78415 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
IRX3P78415 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
IRX3P78415 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
IRX3P78415 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
IRX3P78415 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
IRX3P78415 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
IRX3P78415 POM121L8P-201ENST00000417732 1281 ntBASIC17.65■□□□□ 0.42
IRX3P78415 DEF8-202ENST00000418391 852 ntTSL 2 BASIC17.65■□□□□ 0.42
IRX3P78415 POM121L9P-203ENST00000441984 1285 ntBASIC17.65■□□□□ 0.42
IRX3P78415 SERPINA13P-202ENST00000478994 924 ntBASIC17.65■□□□□ 0.42
IRX3P78415 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC17.65■□□□□ 0.42
IRX3P78415 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC17.65■□□□□ 0.42
IRX3P78415 AL391280.1-201ENST00000506969 1062 ntBASIC17.65■□□□□ 0.42
IRX3P78415 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC17.65■□□□□ 0.42
IRX3P78415 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC17.65■□□□□ 0.42
IRX3P78415 AC044849.1-201ENST00000519737 1188 ntBASIC17.65■□□□□ 0.42
IRX3P78415 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
IRX3P78415 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC17.65■□□□□ 0.42
IRX3P78415 AC105129.2-201ENST00000559536 390 ntBASIC17.65■□□□□ 0.42
IRX3P78415 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC17.65■□□□□ 0.42
IRX3P78415 AC015967.2-201ENST00000624092 234 ntBASIC17.65■□□□□ 0.42
IRX3P78415 AC006435.4-201ENST00000625037 234 ntBASIC17.65■□□□□ 0.42
IRX3P78415 AL356737.1-201ENST00000634391 234 ntBASIC17.65■□□□□ 0.42
IRX3P78415 AC138627.1-207ENST00000641560 1006 ntBASIC17.65■□□□□ 0.42
IRX3P78415 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
IRX3P78415 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC17.65■□□□□ 0.42
IRX3P78415 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC17.65■□□□□ 0.42
IRX3P78415 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC17.65■□□□□ 0.42
IRX3P78415 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
IRX3P78415 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
IRX3P78415 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
IRX3P78415 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
IRX3P78415 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
IRX3P78415 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
IRX3P78415 AC138035.3-201ENST00000622706 2791 ntBASIC17.65■□□□□ 0.42
IRX3P78415 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
IRX3P78415 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
IRX3P78415 SNX18-202ENST00000343017 3140 ntBASIC17.65■□□□□ 0.42
IRX3P78415 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
IRX3P78415 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC17.65■□□□□ 0.42
IRX3P78415 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
IRX3P78415 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
IRX3P78415 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
IRX3P78415 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC17.64■□□□□ 0.41
IRX3P78415 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
IRX3P78415 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
IRX3P78415 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
IRX3P78415 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
IRX3P78415 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
IRX3P78415 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
IRX3P78415 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
IRX3P78415 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
IRX3P78415 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
IRX3P78415 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
IRX3P78415 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC17.64■□□□□ 0.41
IRX3P78415 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
IRX3P78415 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
IRX3P78415 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
IRX3P78415 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
IRX3P78415 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.64■□□□□ 0.41
IRX3P78415 MIR769-201ENST00000390225 118 ntBASIC17.64■□□□□ 0.41
IRX3P78415 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
IRX3P78415 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
IRX3P78415 KRTAP19-9P-201ENST00000421795 191 ntBASIC17.64■□□□□ 0.41
IRX3P78415 RGS5-214ENST00000429865 754 ntTSL 3 BASIC17.64■□□□□ 0.41
IRX3P78415 NKAIN1P1-201ENST00000435754 582 ntBASIC17.64■□□□□ 0.41
IRX3P78415 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC17.64■□□□□ 0.41
IRX3P78415 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC17.64■□□□□ 0.41
IRX3P78415 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC17.64■□□□□ 0.41
IRX3P78415 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC17.64■□□□□ 0.41
IRX3P78415 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC17.64■□□□□ 0.41
IRX3P78415 KLK3-207ENST00000595952 969 ntTSL 3 BASIC17.64■□□□□ 0.41
IRX3P78415 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
IRX3P78415 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
IRX3P78415 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC17.64■□□□□ 0.41
IRX3P78415 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
IRX3P78415 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
IRX3P78415 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC17.64■□□□□ 0.41
IRX3P78415 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
IRX3P78415 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC17.64■□□□□ 0.41
IRX3P78415 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
IRX3P78415 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
IRX3P78415 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
IRX3P78415 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
IRX3P78415 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
IRX3P78415 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
IRX3P78415 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC17.64■□□□□ 0.41
IRX3P78415 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC17.64■□□□□ 0.41
IRX3P78415 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC17.64■□□□□ 0.41
IRX3P78415 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
IRX3P78415 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
IRX3P78415 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
IRX3P78415 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
IRX3P78415 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
IRX3P78415 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
IRX3P78415 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
IRX3P78415 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms