Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CDC42P60953 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CDC42P60953 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CDC42P60953 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CDC42P60953 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
CDC42P60953 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CDC42P60953 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC13.9□□□□□ -0.18
CDC42P60953 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CDC42P60953 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
CDC42P60953 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC13.9□□□□□ -0.18
CDC42P60953 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC13.9□□□□□ -0.18
CDC42P60953 ADH5P3-201ENST00000433842 1137 ntBASIC13.9□□□□□ -0.18
CDC42P60953 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC13.9□□□□□ -0.18
CDC42P60953 PTK7-212ENST00000476760 902 ntTSL 2 BASIC13.9□□□□□ -0.18
CDC42P60953 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC13.9□□□□□ -0.18
CDC42P60953 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC13.9□□□□□ -0.18
CDC42P60953 RNA5SP416-201ENST00000516838 111 ntBASIC13.9□□□□□ -0.18
CDC42P60953 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC13.9□□□□□ -0.18
CDC42P60953 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC13.9□□□□□ -0.18
CDC42P60953 SLC25A39P2-201ENST00000537614 270 ntBASIC13.9□□□□□ -0.18
CDC42P60953 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CDC42P60953 TBCB-211ENST00000589996 724 ntTSL 3 BASIC13.9□□□□□ -0.18
CDC42P60953 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC13.9□□□□□ -0.18
CDC42P60953 AC092865.6-201ENST00000642101 219 ntBASIC13.9□□□□□ -0.18
CDC42P60953 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CDC42P60953 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC13.9□□□□□ -0.18
CDC42P60953 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC13.9□□□□□ -0.18
CDC42P60953 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC13.9□□□□□ -0.18
CDC42P60953 GOLGA8VP-201ENST00000559009 1798 ntBASIC13.9□□□□□ -0.18
CDC42P60953 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CDC42P60953 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
CDC42P60953 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CDC42P60953 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
CDC42P60953 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CDC42P60953 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC13.9□□□□□ -0.18
CDC42P60953 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC13.9□□□□□ -0.18
CDC42P60953 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
CDC42P60953 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CDC42P60953 DEK-201ENST00000244776 1441 ntTSL 2 BASIC13.9□□□□□ -0.19
CDC42P60953 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC13.9□□□□□ -0.19
CDC42P60953 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC13.89□□□□□ -0.19
CDC42P60953 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CDC42P60953 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
CDC42P60953 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CDC42P60953 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDC42P60953 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC13.89□□□□□ -0.19
CDC42P60953 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDC42P60953 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDC42P60953 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDC42P60953 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDC42P60953 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDC42P60953 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CDC42P60953 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDC42P60953 RPS19-201ENST00000221975 500 ntTSL 3 BASIC13.89□□□□□ -0.19
CDC42P60953 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
CDC42P60953 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
CDC42P60953 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CDC42P60953 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.89□□□□□ -0.19
CDC42P60953 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CDC42P60953 FAM58CP-201ENST00000435741 640 ntBASIC13.89□□□□□ -0.19
CDC42P60953 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CDC42P60953 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC13.89□□□□□ -0.19
CDC42P60953 GATB-205ENST00000508611 605 ntTSL 2 BASIC13.89□□□□□ -0.19
CDC42P60953 AC022447.6-201ENST00000515522 438 ntBASIC13.89□□□□□ -0.19
CDC42P60953 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC13.89□□□□□ -0.19
CDC42P60953 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC13.89□□□□□ -0.19
CDC42P60953 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDC42P60953 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC13.89□□□□□ -0.19
CDC42P60953 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC13.89□□□□□ -0.19
CDC42P60953 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC13.89□□□□□ -0.19
CDC42P60953 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC13.89□□□□□ -0.19
CDC42P60953 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
CDC42P60953 AC055717.3-201ENST00000622967 595 ntBASIC13.89□□□□□ -0.19
CDC42P60953 AC084121.4-201ENST00000641598 221 ntBASIC13.89□□□□□ -0.19
CDC42P60953 AC092902.6-201ENST00000641783 218 ntBASIC13.89□□□□□ -0.19
CDC42P60953 AF228730.8-201ENST00000642140 221 ntBASIC13.89□□□□□ -0.19
CDC42P60953 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDC42P60953 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDC42P60953 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
CDC42P60953 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDC42P60953 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDC42P60953 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC13.89□□□□□ -0.19
CDC42P60953 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CDC42P60953 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CDC42P60953 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
CDC42P60953 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC13.89□□□□□ -0.19
CDC42P60953 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CDC42P60953 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC13.89□□□□□ -0.19
CDC42P60953 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDC42P60953 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
CDC42P60953 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDC42P60953 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDC42P60953 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDC42P60953 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDC42P60953 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDC42P60953 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDC42P60953 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDC42P60953 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
CDC42P60953 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC13.88□□□□□ -0.19
CDC42P60953 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms