Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHMP4BP1P59074 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHMP4BP1P59074 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC17.36■□□□□ 0.37
CHMP4BP1P59074 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CHMP4BP1P59074 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHMP4BP1P59074 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHMP4BP1P59074 TCAF2P1-201ENST00000291129 2421 ntBASIC17.36■□□□□ 0.37
CHMP4BP1P59074 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC17.36■□□□□ 0.37
CHMP4BP1P59074 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHMP4BP1P59074 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC17.36■□□□□ 0.37
CHMP4BP1P59074 AC087481.3-201ENST00000602886 1894 ntBASIC17.36■□□□□ 0.37
CHMP4BP1P59074 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC17.36■□□□□ 0.37
CHMP4BP1P59074 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC17.36■□□□□ 0.37
CHMP4BP1P59074 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC17.36■□□□□ 0.37
CHMP4BP1P59074 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC17.36■□□□□ 0.37
CHMP4BP1P59074 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC17.36■□□□□ 0.37
CHMP4BP1P59074 RN7SL560P-201ENST00000577943 264 ntBASIC17.36■□□□□ 0.37
CHMP4BP1P59074 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHMP4BP1P59074 AC093813.1-201ENST00000605066 256 ntBASIC17.36■□□□□ 0.37
CHMP4BP1P59074 AL606495.2-201ENST00000605867 535 ntBASIC17.36■□□□□ 0.37
CHMP4BP1P59074 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHMP4BP1P59074 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHMP4BP1P59074 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHMP4BP1P59074 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHMP4BP1P59074 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHMP4BP1P59074 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC17.36■□□□□ 0.37
CHMP4BP1P59074 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHMP4BP1P59074 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHMP4BP1P59074 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
CHMP4BP1P59074 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CHMP4BP1P59074 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHMP4BP1P59074 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC17.36■□□□□ 0.37
CHMP4BP1P59074 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHMP4BP1P59074 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC17.36■□□□□ 0.37
CHMP4BP1P59074 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CHMP4BP1P59074 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHMP4BP1P59074 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHMP4BP1P59074 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CHMP4BP1P59074 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHMP4BP1P59074 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHMP4BP1P59074 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC17.35■□□□□ 0.37
CHMP4BP1P59074 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHMP4BP1P59074 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC17.35■□□□□ 0.37
CHMP4BP1P59074 RER1-203ENST00000378513 3000 ntTSL 3 BASIC17.35■□□□□ 0.37
CHMP4BP1P59074 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHMP4BP1P59074 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHMP4BP1P59074 API5-202ENST00000420461 2009 ntTSL 2 BASIC17.35■□□□□ 0.37
CHMP4BP1P59074 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC17.35■□□□□ 0.37
CHMP4BP1P59074 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CHMP4BP1P59074 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CHMP4BP1P59074 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHMP4BP1P59074 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHMP4BP1P59074 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CHMP4BP1P59074 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC17.35■□□□□ 0.37
CHMP4BP1P59074 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHMP4BP1P59074 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
CHMP4BP1P59074 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC17.35■□□□□ 0.37
CHMP4BP1P59074 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC17.35■□□□□ 0.37
CHMP4BP1P59074 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC17.35■□□□□ 0.37
CHMP4BP1P59074 MDH2-205ENST00000461263 648 ntTSL 2 BASIC17.35■□□□□ 0.37
CHMP4BP1P59074 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC17.35■□□□□ 0.37
CHMP4BP1P59074 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC17.35■□□□□ 0.37
CHMP4BP1P59074 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC17.35■□□□□ 0.37
CHMP4BP1P59074 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CHMP4BP1P59074 KSR1-207ENST00000578981 748 ntTSL 4 BASIC17.35■□□□□ 0.37
CHMP4BP1P59074 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHMP4BP1P59074 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CHMP4BP1P59074 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHMP4BP1P59074 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CHMP4BP1P59074 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CHMP4BP1P59074 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHMP4BP1P59074 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHMP4BP1P59074 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CHMP4BP1P59074 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHMP4BP1P59074 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CHMP4BP1P59074 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC17.35■□□□□ 0.37
CHMP4BP1P59074 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHMP4BP1P59074 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC17.35■□□□□ 0.37
CHMP4BP1P59074 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHMP4BP1P59074 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CHMP4BP1P59074 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CHMP4BP1P59074 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHMP4BP1P59074 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHMP4BP1P59074 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CHMP4BP1P59074 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHMP4BP1P59074 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC17.35■□□□□ 0.37
CHMP4BP1P59074 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHMP4BP1P59074 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHMP4BP1P59074 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHMP4BP1P59074 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHMP4BP1P59074 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHMP4BP1P59074 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHMP4BP1P59074 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHMP4BP1P59074 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CHMP4BP1P59074 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHMP4BP1P59074 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC17.34■□□□□ 0.37
CHMP4BP1P59074 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
CHMP4BP1P59074 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC17.34■□□□□ 0.37
CHMP4BP1P59074 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
CHMP4BP1P59074 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms