Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN2P57739 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN2P57739 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CLDN2P57739 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLDN2P57739 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
CLDN2P57739 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CLDN2P57739 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CLDN2P57739 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC14.88□□□□□ -0.03
CLDN2P57739 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLDN2P57739 AC011840.2-201ENST00000563063 1520 ntBASIC14.88□□□□□ -0.03
CLDN2P57739 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.88□□□□□ -0.03
CLDN2P57739 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLDN2P57739 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLDN2P57739 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLDN2P57739 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLDN2P57739 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLDN2P57739 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CLDN2P57739 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
CLDN2P57739 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CLDN2P57739 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CLDN2P57739 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC14.88□□□□□ -0.03
CLDN2P57739 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CLDN2P57739 AC091804.1-201ENST00000486888 567 ntBASIC14.88□□□□□ -0.03
CLDN2P57739 SCARNA20.5-201ENST00000516991 142 ntBASIC14.88□□□□□ -0.03
CLDN2P57739 AC044849.1-201ENST00000519737 1188 ntBASIC14.88□□□□□ -0.03
CLDN2P57739 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CLDN2P57739 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC14.88□□□□□ -0.03
CLDN2P57739 AC068587.10-201ENST00000641210 219 ntBASIC14.88□□□□□ -0.03
CLDN2P57739 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLDN2P57739 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC14.88□□□□□ -0.03
CLDN2P57739 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.88□□□□□ -0.03
CLDN2P57739 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC14.88□□□□□ -0.03
CLDN2P57739 REXO1L2P-201ENST00000425429 2069 ntBASIC14.88□□□□□ -0.03
CLDN2P57739 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.88□□□□□ -0.03
CLDN2P57739 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
CLDN2P57739 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.88□□□□□ -0.03
CLDN2P57739 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC14.87□□□□□ -0.03
CLDN2P57739 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN2P57739 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN2P57739 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN2P57739 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN2P57739 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN2P57739 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC14.87□□□□□ -0.03
CLDN2P57739 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN2P57739 LILRP1-201ENST00000444199 1370 ntBASIC14.87□□□□□ -0.03
CLDN2P57739 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN2P57739 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CLDN2P57739 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.87□□□□□ -0.03
CLDN2P57739 AP000593.2-201ENST00000542775 1433 ntBASIC14.87□□□□□ -0.03
CLDN2P57739 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN2P57739 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN2P57739 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN2P57739 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN2P57739 SMS-201ENST00000379404 1174 ntTSL 3 BASIC14.87□□□□□ -0.03
CLDN2P57739 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC14.87□□□□□ -0.03
CLDN2P57739 RN7SKP175-201ENST00000408472 289 ntBASIC14.87□□□□□ -0.03
CLDN2P57739 NKAIN1P1-201ENST00000435754 582 ntBASIC14.87□□□□□ -0.03
CLDN2P57739 AC005077.2-201ENST00000449786 690 ntBASIC14.87□□□□□ -0.03
CLDN2P57739 IGHJ2P-201ENST00000454480 60 ntBASIC14.87□□□□□ -0.03
CLDN2P57739 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC14.87□□□□□ -0.03
CLDN2P57739 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC14.87□□□□□ -0.03
CLDN2P57739 NEU3-202ENST00000526068 431 ntTSL 2 BASIC14.87□□□□□ -0.03
CLDN2P57739 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC14.87□□□□□ -0.03
CLDN2P57739 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC14.87□□□□□ -0.03
CLDN2P57739 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC14.87□□□□□ -0.03
CLDN2P57739 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC14.87□□□□□ -0.03
CLDN2P57739 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CLDN2P57739 AL358472.3-201ENST00000608147 415 ntBASIC14.87□□□□□ -0.03
CLDN2P57739 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC14.87□□□□□ -0.03
CLDN2P57739 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN2P57739 AL021578.1-201ENST00000613646 709 ntBASIC14.87□□□□□ -0.03
CLDN2P57739 AL136301.1-201ENST00000615830 422 ntBASIC14.87□□□□□ -0.03
CLDN2P57739 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN2P57739 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC14.87□□□□□ -0.03
CLDN2P57739 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN2P57739 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN2P57739 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN2P57739 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.87□□□□□ -0.03
CLDN2P57739 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
CLDN2P57739 AC138028.6-201ENST00000616106 1482 ntBASIC14.87□□□□□ -0.03
CLDN2P57739 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN2P57739 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC14.87□□□□□ -0.03
CLDN2P57739 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN2P57739 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
CLDN2P57739 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN2P57739 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
CLDN2P57739 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CLDN2P57739 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN2P57739 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN2P57739 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN2P57739 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN2P57739 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN2P57739 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
CLDN2P57739 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN2P57739 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC14.86□□□□□ -0.03
CLDN2P57739 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.86□□□□□ -0.03
CLDN2P57739 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN2P57739 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
CLDN2P57739 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN2P57739 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms