Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 RBM7-207ENST00000544582 692 ntTSL 3 BASIC13.95□□□□□ -0.18
CDH11P55287 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC13.95□□□□□ -0.18
CDH11P55287 SSH2-210ENST00000582084 560 ntTSL 3 BASIC13.95□□□□□ -0.18
CDH11P55287 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC13.95□□□□□ -0.18
CDH11P55287 AC008738.7-201ENST00000609744 511 ntBASIC13.95□□□□□ -0.18
CDH11P55287 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC13.95□□□□□ -0.18
CDH11P55287 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDH11P55287 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDH11P55287 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
CDH11P55287 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC13.95□□□□□ -0.18
CDH11P55287 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDH11P55287 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDH11P55287 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC13.95□□□□□ -0.18
CDH11P55287 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDH11P55287 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CDH11P55287 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
CDH11P55287 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
CDH11P55287 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDH11P55287 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDH11P55287 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDH11P55287 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
CDH11P55287 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
CDH11P55287 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDH11P55287 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDH11P55287 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDH11P55287 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CDH11P55287 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC13.94□□□□□ -0.18
CDH11P55287 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
CDH11P55287 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDH11P55287 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
CDH11P55287 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC13.94□□□□□ -0.18
CDH11P55287 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDH11P55287 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDH11P55287 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CDH11P55287 NIN-202ENST00000324330 4364 ntTSL 5 BASIC13.94□□□□□ -0.18
CDH11P55287 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDH11P55287 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
CDH11P55287 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
CDH11P55287 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDH11P55287 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
CDH11P55287 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDH11P55287 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDH11P55287 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
CDH11P55287 COPE-202ENST00000349893 948 ntTSL 2 BASIC13.94□□□□□ -0.18
CDH11P55287 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CDH11P55287 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
CDH11P55287 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
CDH11P55287 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CDH11P55287 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC13.94□□□□□ -0.18
CDH11P55287 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC13.94□□□□□ -0.18
CDH11P55287 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDH11P55287 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC13.94□□□□□ -0.18
CDH11P55287 CFL1-212ENST00000531413 636 ntTSL 3 BASIC13.94□□□□□ -0.18
CDH11P55287 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
CDH11P55287 AC135586.1-201ENST00000539323 574 ntBASIC13.94□□□□□ -0.18
CDH11P55287 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC13.94□□□□□ -0.18
CDH11P55287 AC005225.4-201ENST00000557330 545 ntBASIC13.94□□□□□ -0.18
CDH11P55287 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC13.94□□□□□ -0.18
CDH11P55287 CMC2-214ENST00000565925 640 ntTSL 5 BASIC13.94□□□□□ -0.18
CDH11P55287 CECR7-204ENST00000609932 568 ntTSL 2 BASIC13.94□□□□□ -0.18
CDH11P55287 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CDH11P55287 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
CDH11P55287 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDH11P55287 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDH11P55287 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC13.94□□□□□ -0.18
CDH11P55287 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC13.94□□□□□ -0.18
CDH11P55287 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDH11P55287 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDH11P55287 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CDH11P55287 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CDH11P55287 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC13.94□□□□□ -0.18
CDH11P55287 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CDH11P55287 OS9-204ENST00000389146 2091 ntTSL 2 BASIC13.94□□□□□ -0.18
CDH11P55287 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.94□□□□□ -0.18
CDH11P55287 AC005840.4-201ENST00000541242 2494 ntBASIC13.93□□□□□ -0.18
CDH11P55287 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CDH11P55287 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
CDH11P55287 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
CDH11P55287 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
CDH11P55287 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDH11P55287 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC13.93□□□□□ -0.18
CDH11P55287 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC13.93□□□□□ -0.18
CDH11P55287 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC13.93□□□□□ -0.18
CDH11P55287 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDH11P55287 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
CDH11P55287 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDH11P55287 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDH11P55287 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CDH11P55287 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
CDH11P55287 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC13.93□□□□□ -0.18
CDH11P55287 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CDH11P55287 METTL26-204ENST00000397665 558 ntTSL 2 BASIC13.93□□□□□ -0.18
CDH11P55287 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDH11P55287 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CDH11P55287 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CDH11P55287 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC13.93□□□□□ -0.18
CDH11P55287 COQ6-210ENST00000554920 649 ntTSL 3 BASIC13.93□□□□□ -0.18
CDH11P55287 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC13.93□□□□□ -0.18
CDH11P55287 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC13.93□□□□□ -0.18
CDH11P55287 AC009407.1-201ENST00000568958 598 ntBASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms