Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
EPHA4P54764 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC14.55□□□□□ -0.08
EPHA4P54764 OARD1-212ENST00000482515 832 ntTSL 2 BASIC14.55□□□□□ -0.08
EPHA4P54764 CDC23-208ENST00000505120 455 ntTSL 3 BASIC14.55□□□□□ -0.08
EPHA4P54764 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC14.55□□□□□ -0.08
EPHA4P54764 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
EPHA4P54764 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC14.55□□□□□ -0.08
EPHA4P54764 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC14.55□□□□□ -0.08
EPHA4P54764 AC004466.1-201ENST00000599515 1080 ntBASIC14.55□□□□□ -0.08
EPHA4P54764 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
EPHA4P54764 FKBP4P6-201ENST00000457486 1332 ntBASIC14.55□□□□□ -0.08
EPHA4P54764 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC14.55□□□□□ -0.08
EPHA4P54764 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
EPHA4P54764 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
EPHA4P54764 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
EPHA4P54764 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
EPHA4P54764 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
EPHA4P54764 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
EPHA4P54764 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
EPHA4P54764 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
EPHA4P54764 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
EPHA4P54764 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
EPHA4P54764 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
EPHA4P54764 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.55□□□□□ -0.08
EPHA4P54764 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
EPHA4P54764 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
EPHA4P54764 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
EPHA4P54764 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
EPHA4P54764 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
EPHA4P54764 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
EPHA4P54764 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
EPHA4P54764 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
EPHA4P54764 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.54□□□□□ -0.08
EPHA4P54764 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
EPHA4P54764 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.54□□□□□ -0.08
EPHA4P54764 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
EPHA4P54764 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
EPHA4P54764 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
EPHA4P54764 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.54□□□□□ -0.08
EPHA4P54764 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC14.54□□□□□ -0.08
EPHA4P54764 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
EPHA4P54764 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
EPHA4P54764 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
EPHA4P54764 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC14.54□□□□□ -0.08
EPHA4P54764 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
EPHA4P54764 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
EPHA4P54764 KRTAP10-13P-201ENST00000412914 571 ntBASIC14.54□□□□□ -0.08
EPHA4P54764 NME6-203ENST00000415644 849 ntTSL 2 BASIC14.54□□□□□ -0.08
EPHA4P54764 AC004945.1-201ENST00000416738 983 ntBASIC14.54□□□□□ -0.08
EPHA4P54764 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC14.54□□□□□ -0.08
EPHA4P54764 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC14.54□□□□□ -0.08
EPHA4P54764 AC091804.1-201ENST00000486888 567 ntBASIC14.54□□□□□ -0.08
EPHA4P54764 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
EPHA4P54764 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
EPHA4P54764 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC14.54□□□□□ -0.08
EPHA4P54764 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
EPHA4P54764 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC14.54□□□□□ -0.08
EPHA4P54764 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC14.54□□□□□ -0.08
EPHA4P54764 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
EPHA4P54764 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
EPHA4P54764 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC14.54□□□□□ -0.08
EPHA4P54764 KLK11-210ENST00000600362 759 ntTSL 3 BASIC14.54□□□□□ -0.08
EPHA4P54764 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
EPHA4P54764 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
EPHA4P54764 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC14.54□□□□□ -0.08
EPHA4P54764 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
EPHA4P54764 KRT8P4-201ENST00000509735 1454 ntBASIC14.54□□□□□ -0.08
EPHA4P54764 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
EPHA4P54764 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC14.54□□□□□ -0.08
EPHA4P54764 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
EPHA4P54764 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
EPHA4P54764 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
EPHA4P54764 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.54□□□□□ -0.08
EPHA4P54764 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC14.54□□□□□ -0.08
EPHA4P54764 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.54□□□□□ -0.08
EPHA4P54764 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
EPHA4P54764 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC14.54□□□□□ -0.08
EPHA4P54764 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.54□□□□□ -0.08
EPHA4P54764 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
EPHA4P54764 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
EPHA4P54764 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
EPHA4P54764 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
EPHA4P54764 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
EPHA4P54764 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
EPHA4P54764 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.53□□□□□ -0.08
EPHA4P54764 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
EPHA4P54764 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
EPHA4P54764 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
EPHA4P54764 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.53□□□□□ -0.08
EPHA4P54764 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.53□□□□□ -0.08
EPHA4P54764 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC14.53□□□□□ -0.08
EPHA4P54764 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.53□□□□□ -0.08
EPHA4P54764 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC14.53□□□□□ -0.08
EPHA4P54764 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
EPHA4P54764 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
EPHA4P54764 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
EPHA4P54764 HARS-202ENST00000415192 1401 ntTSL 2 BASIC14.53□□□□□ -0.08
EPHA4P54764 WASH3P-207ENST00000560956 1394 ntBASIC14.53□□□□□ -0.08
EPHA4P54764 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
EPHA4P54764 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms